RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 MRPL27Q9P0M9 148 aaKnown RBP17.73■□□□□ 0.43
SPSB3-208ENST00000566339 GOLT1BQ9Y3E0 138 aa17.73■□□□□ 0.43
SPSB3-208ENST00000566339 MAP1BP46821 2468 aaKnown RBP17.72■□□□□ 0.43
SPSB3-208ENST00000566339 USF3Q68DE3 2245 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 ZNF253O75346 499 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 FTH1P19P0C7X4 201 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 IRF2P14316 349 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 IGFBP2P18065 325 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 PPOXP50336 477 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 COL5A1-AS1Q5SY13 56 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 SCNM1Q9BWG6 230 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 GNB4Q9HAV0 340 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 MSL2Q9HCI7 577 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 PLSCR4Q9NRQ2 329 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 NAT8BQ9UHF3 227 aa17.72■□□□□ 0.43
SPSB3-208ENST00000566339 KIR2DL2P43627 348 aaPredicted RBP17.71■□□□□ 0.43
SPSB3-208ENST00000566339 FABP6P51161 128 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 ZNF134P52741 427 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 PSG5Q15238 335 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 MIR17HGQ75NE6 70 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 OR1L8Q8NGR8 309 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 VN1R17PQ8TDU5 208 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 CHRDL1Q9BU40 450 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 LINC00574Q9H8X3 128 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 PLEKHA3Q9HB20 300 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 FOXH1O75593 365 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 HNF1AP20823 631 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 CTRLP40313 264 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 LTC4SQ16873 150 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 C3orf36Q3SXR2 165 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 VKORC1L1Q8N0U8 176 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 ST6GALNAC3Q8NDV1 305 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 TRIB1Q96RU8 372 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 OR51B2Q9Y5P1 312 aa17.71■□□□□ 0.43
SPSB3-208ENST00000566339 DOCK7Q96N67 2140 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 KBTBD11-OT1A0A1B0GTJ5 212 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 IZUMO1RA6ND01 250 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 INS-IGF2F8WCM5 200 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 UPK2O00526 184 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 LHBP01229 141 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 TFF1P04155 84 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 G0S2P27469 103 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 RELQ04864 619 aaPredicted RBP17.7■□□□□ 0.42
SPSB3-208ENST00000566339 C17orf58Q2M2W7 97 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 FAM231DQ6ZW35 169 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 Q8N976 141 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 CACNG8Q8WXS5 425 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 UQCR10Q9UDW1 63 aa17.7■□□□□ 0.42
SPSB3-208ENST00000566339 DIRC3C9JPN6 131 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 C8orf88P0DMB2 117 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 CRYBB3P26998 211 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 CDKN1AP38936 164 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 SUMO1P63165 101 aaKnown RBP17.69■□□□□ 0.42
SPSB3-208ENST00000566339 KLHDC1Q8N7A1 406 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 OR5B3Q8NH48 314 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 FAM222BQ8WU58 562 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 NRN1Q9NPD7 142 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 FBXL7Q9UJT9 491 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 PAM16Q9Y3D7 125 aa17.69■□□□□ 0.42
SPSB3-208ENST00000566339 IGHV1-18A0A0C4DH31 117 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 AGFG2O95081 481 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 PRRX1P54821 245 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 MRPS11P82912 194 aaKnown RBP17.68■□□□□ 0.42
SPSB3-208ENST00000566339 CT45A1Q5HYN5 189 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 ZNF439Q8NDP4 499 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 CT45A3Q8NHU0 189 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 IGF2BP2-AS1Q96M15 143 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 FAM234AQ9H0X4 552 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 LPAR2Q9HBW0 351 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 TBL2Q9Y4P3 447 aaKnown RBP17.68■□□□□ 0.42
SPSB3-208ENST00000566339 DMXL2Q8TDJ6 3036 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 C20orf202A1L168 122 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 J3QR06 171 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 ZNF324O75467 553 aaPredicted RBP17.68■□□□□ 0.42
SPSB3-208ENST00000566339 IGHV3-13P01766 116 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 OR2Z1Q8NG97 314 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 SARAFQ96BY9 339 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 BET1LQ9NYM9 111 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 DKK4Q9UBT3 224 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 CDC42EP3Q9UKI2 254 aa17.68■□□□□ 0.42
SPSB3-208ENST00000566339 DOCK11Q5JSL3 2073 aa17.67■□□□□ 0.42
SPSB3-208ENST00000566339 SAA2P0DJI9 122 aaPredicted RBP17.67■□□□□ 0.42
SPSB3-208ENST00000566339 GATA4P43694 442 aa17.67■□□□□ 0.42
SPSB3-208ENST00000566339 CASP6P55212 293 aa17.67■□□□□ 0.42
SPSB3-208ENST00000566339 IBA57Q5T440 356 aaKnown RBP17.67■□□□□ 0.42
SPSB3-208ENST00000566339 IGF2RP11717 2491 aa17.67■□□□□ 0.42
SPSB3-208ENST00000566339 A0A1W2PS18 150 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 IGLV2-8P01709 118 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 AMTP48728 403 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 PMCHL1Q16048 86 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 CNEP1R1Q8N9A8 125 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 ZNF503Q96F45 646 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 ZNF714Q96N38 554 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 ZZEF1O43149 2961 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 HCFC1P51610 2035 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 OR5I1Q13606 314 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 TDRG1Q3Y452 100 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 SLC25A33Q9BSK2 321 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 DCAF16Q9NXF7 216 aa17.66■□□□□ 0.42
SPSB3-208ENST00000566339 ZFP30Q9Y2G7 519 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms