RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 SPSB3Q6PJ21 355 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 OR1L6Q8NGR2 347 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 OR5B3Q8NH48 314 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 SEC22AQ96IW7 307 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 TMEM56Q96MV1 263 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 ATP6V0BQ99437 205 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 GGTLC1Q9BX51 225 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 C5orf66Q9H5L9 145 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 FAM212BQ9NTI7 297 aaPredicted RBP13.66□□□□□ -0.22
USB1-213ENST00000566292 FKBP11Q9NYL4 201 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 IGHV3OR16-8A0A075B7F1 116 aa13.65□□□□□ -0.22
USB1-213ENST00000566292 LOC102724200A0A096LPH7 203 aaPredicted RBP13.65□□□□□ -0.22
USB1-213ENST00000566292 UCP3P55916 312 aa13.65□□□□□ -0.22
USB1-213ENST00000566292 OR2C3Q8N628 320 aa13.65□□□□□ -0.22
USB1-213ENST00000566292 TSC22D3Q99576 134 aa13.65□□□□□ -0.22
USB1-213ENST00000566292 DAZ1Q9NQZ3 744 aaKnown RBP13.65□□□□□ -0.22
USB1-213ENST00000566292 HYDINQ4G0P3 5121 aa13.65□□□□□ -0.23
USB1-213ENST00000566292 M0QYG6 137 aa13.64□□□□□ -0.23
USB1-213ENST00000566292 NDUFA4O00483 81 aa13.64□□□□□ -0.23
USB1-213ENST00000566292 S100GP29377 79 aa13.64□□□□□ -0.23
USB1-213ENST00000566292 SLC38A6Q8IZM9 456 aa13.64□□□□□ -0.23
USB1-213ENST00000566292 UBAC2Q8NBM4 344 aa13.64□□□□□ -0.23
USB1-213ENST00000566292 OR1P1Q8NH06 330 aa13.64□□□□□ -0.23
USB1-213ENST00000566292 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
USB1-213ENST00000566292 OVOL2Q9BRP0 275 aa13.64□□□□□ -0.23
USB1-213ENST00000566292 TSPAN4O14817 238 aa13.63□□□□□ -0.23
USB1-213ENST00000566292 ZNF207O43670 478 aaKnown RBP13.63□□□□□ -0.23
USB1-213ENST00000566292 CTSGP08311 255 aa13.63□□□□□ -0.23
USB1-213ENST00000566292 Q56UQ5 140 aa13.63□□□□□ -0.23
USB1-213ENST00000566292 MRGPRFQ96AM1 343 aa13.63□□□□□ -0.23
USB1-213ENST00000566292 SPAG8Q99932 426 aaPredicted RBP13.63□□□□□ -0.23
USB1-213ENST00000566292 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
USB1-213ENST00000566292 NAA50Q9GZZ1 169 aaKnown RBP13.63□□□□□ -0.23
USB1-213ENST00000566292 UBQLN2Q9UHD9 624 aa13.63□□□□□ -0.23
USB1-213ENST00000566292 ALMS1Q8TCU4 4167 aa13.63□□□□□ -0.23
USB1-213ENST00000566292 K7EMT4 169 aa13.62□□□□□ -0.23
USB1-213ENST00000566292 RORCP51449 518 aa13.62□□□□□ -0.23
USB1-213ENST00000566292 PLECQ15149 4684 aaKnown RBP13.62□□□□□ -0.23
USB1-213ENST00000566292 RNASE12Q5GAN4 147 aaKnown RBP13.62□□□□□ -0.23
USB1-213ENST00000566292 H2BFWTQ7Z2G1 175 aa13.62□□□□□ -0.23
USB1-213ENST00000566292 OR4A16Q8NH70 328 aa13.62□□□□□ -0.23
USB1-213ENST00000566292 FAM25AB3EWG3 89 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 FAM25CB3EWG5 89 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 FAM25GB3EWG6 89 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 I3L2K1 104 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 PRCDQ00LT1 54 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 ODF3L2Q3SX64 289 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 ZNF114Q8NC26 417 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 MISP3Q96FF7 219 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 KLK11Q9UBX7 282 aa13.61□□□□□ -0.23
USB1-213ENST00000566292 EPPK1P58107 5090 aaKnown RBP13.61□□□□□ -0.23
USB1-213ENST00000566292 C15orf62A8K5M9 175 aa13.6□□□□□ -0.23
USB1-213ENST00000566292 SMIM18P0DKX4 95 aa13.6□□□□□ -0.23
USB1-213ENST00000566292 RND3P61587 244 aa13.6□□□□□ -0.23
USB1-213ENST00000566292 CTF1Q16619 201 aa13.6□□□□□ -0.23
USB1-213ENST00000566292 IZUMO4Q1ZYL8 232 aa13.6□□□□□ -0.23
USB1-213ENST00000566292 LAMTOR1Q6IAA8 161 aa13.6□□□□□ -0.23
USB1-213ENST00000566292 LHFPL1Q86WI0 220 aa13.6□□□□□ -0.23
USB1-213ENST00000566292 OR52I2Q8NH67 350 aa13.6□□□□□ -0.23
USB1-213ENST00000566292 GABARAPO95166 117 aa13.59□□□□□ -0.23
USB1-213ENST00000566292 MT-CO2P00403 227 aa13.59□□□□□ -0.23
USB1-213ENST00000566292 IGHV3-48P01763 117 aa13.59□□□□□ -0.23
USB1-213ENST00000566292 CTSDP07339 412 aaPredicted RBP13.59□□□□□ -0.23
USB1-213ENST00000566292 PI3P19957 117 aa13.59□□□□□ -0.23
USB1-213ENST00000566292 FCGR2BP31994 310 aaPredicted RBP13.59□□□□□ -0.23
USB1-213ENST00000566292 MFAP4P55083 255 aa13.59□□□□□ -0.23
USB1-213ENST00000566292 HSPE1P61604 102 aaKnown RBP13.59□□□□□ -0.23
USB1-213ENST00000566292 MZT2AQ6P582 158 aa13.59□□□□□ -0.23
USB1-213ENST00000566292 SMPXQ9UHP9 88 aa13.59□□□□□ -0.23
USB1-213ENST00000566292 NUPL2O15504 423 aaKnown RBP13.58□□□□□ -0.24
USB1-213ENST00000566292 IGKV1-5P01602 117 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 CD3DP04234 171 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 P0C879 139 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 PGAM2P15259 253 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 RELQ04864 619 aaPredicted RBP13.58□□□□□ -0.24
USB1-213ENST00000566292 SPINK9Q5DT21 86 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 RNASE10Q5GAN6 216 aaKnown RBP13.58□□□□□ -0.24
USB1-213ENST00000566292 ZNF486Q96H40 463 aaPredicted RBP13.58□□□□□ -0.24
USB1-213ENST00000566292 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 TP53RKQ96S44 253 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 RNF2Q99496 336 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 TXN2Q99757 166 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 EXTL2Q9UBQ6 330 aa13.58□□□□□ -0.24
USB1-213ENST00000566292 IGHV3-49A0A0A0MS15 119 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 OR4C46A6NHA9 309 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 CHEK1O14757 476 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 JTBO76095 146 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 ZNF182P17025 639 aaPredicted RBP13.57□□□□□ -0.24
USB1-213ENST00000566292 PIGPP57054 158 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 WFDC3Q8IUB2 231 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 OR4D10Q8NGI6 311 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 AP3S1Q92572 193 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 ABHD1Q96SE0 405 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 RHPN1-AS1Q9BWJ2 59 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 NXF2Q9GZY0 626 aaKnown RBP13.57□□□□□ -0.24
USB1-213ENST00000566292 MTFP1Q9UDX5 166 aa13.57□□□□□ -0.24
USB1-213ENST00000566292 A0A0B4J293 547 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms