RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CRYGCP07315 174 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 AREGP15514 252 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 HIST1H1BP16401 226 aaKnown RBP6.12□□□□□ -1.43
CDH1-208ENST00000565810 CTRB1P17538 263 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 TAS2R30P59541 319 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 WT1-ASQ06250 92 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 IL15RAQ13261 267 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 RAB32Q13637 225 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 CTRB2Q6GPI1 263 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 SLC25A24Q6NUK1 477 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 TEX38Q6PEX7 206 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 TMEM65Q6PI78 240 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 ZNF329Q86UD4 541 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.12□□□□□ -1.43
CDH1-208ENST00000565810 SLC24A4Q8NFF2 622 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 OR4X2Q8NGF9 303 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 OR2T35Q8NGX2 323 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 OR1P1Q8NH06 330 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 FAM110DQ8TAY7 271 aaPredicted RBP6.12□□□□□ -1.43
CDH1-208ENST00000565810 TMEM158Q8WZ71 300 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 SMIM8Q96KF7 97 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 SERTAD4Q9NUC0 356 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 PSENENQ9NZ42 101 aa6.12□□□□□ -1.43
CDH1-208ENST00000565810 PAIP2BQ9ULR5 123 aaKnown RBP6.12□□□□□ -1.43
CDH1-208ENST00000565810 STRAPQ9Y3F4 350 aaKnown RBP6.12□□□□□ -1.43
CDH1-208ENST00000565810 F11RQ9Y624 299 aaKnown RBP6.12□□□□□ -1.43
CDH1-208ENST00000565810 NSD1Q96L73 2696 aaPredicted RBP6.12□□□□□ -1.43
CDH1-208ENST00000565810 A0A1B0GW64 132 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 TMEM89A2RUT3 159 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 CORTO00230 105 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 DEDDO75618 318 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 MPC2O95563 127 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 IFNA4P05014 189 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 ELANEP08246 267 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 OR8U8P0C7N1 319 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 PF4V1P10720 104 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 NPY1RP25929 384 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 PPIFP30405 207 aaKnown RBP6.11□□□□□ -1.43
CDH1-208ENST00000565810 NUP62P37198 522 aaPredicted RBP6.11□□□□□ -1.43
CDH1-208ENST00000565810 CAV2P51636 162 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 SPANXN5Q5MJ07 72 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 ASPHD1Q5U4P2 390 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 PRSS54Q6PEW0 395 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 AKAP14Q86UN6 197 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 PRIMA1Q86XR5 153 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 KLHDC1Q8N7A1 406 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 ZNF114Q8NC26 417 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 OR5AU1Q8NGC0 362 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 CHAC2Q8WUX2 184 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 TAF15Q92804 592 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDH1-208ENST00000565810 P2RX4Q99571 388 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 SLA2Q9H6Q3 261 aa6.11□□□□□ -1.43
CDH1-208ENST00000565810 A0A0G2JLM5 398 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 RPS10-NUDT3A0A1W2PQS6 291 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 H3BP45 60 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 TSC22D2O75157 780 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 SCAF4O95104 1147 aaKnown RBP6.1□□□□□ -1.43
CDH1-208ENST00000565810 BRI3O95415 125 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 IGHG4P01861 327 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 TRGV3P03979 118 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 RNASE2P10153 161 aaKnown RBP6.1□□□□□ -1.43
CDH1-208ENST00000565810 MDKP21741 143 aaPredicted RBP6.1□□□□□ -1.43
CDH1-208ENST00000565810 P2RY1P47900 373 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 CFHR3Q02985 330 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 FOXE3Q13461 319 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 EXOSC2Q13868 293 aaKnown RBP6.1□□□□□ -1.43
CDH1-208ENST00000565810 C2orf83Q53S99 150 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 C11orf87Q6NUJ2 197 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 ETV3LQ6ZN32 361 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 STX12Q86Y82 276 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 DCUN1D4Q92564 292 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 WDR89Q96FK6 387 aaPredicted RBP6.1□□□□□ -1.43
CDH1-208ENST00000565810 USMG5Q96IX5 58 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 MS4A10Q96PG2 267 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 SLC25A31Q9H0C2 315 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 RANGRFQ9HD47 186 aaPredicted RBP6.1□□□□□ -1.43
CDH1-208ENST00000565810 ZC4H2Q9NQZ6 224 aa6.1□□□□□ -1.43
CDH1-208ENST00000565810 TEP1Q99973 2627 aaKnown RBP6.09□□□□□ -1.43
CDH1-208ENST00000565810 IGLV11-55A0A075B6I3 123 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 FAM223BA6NKX1 122 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 PFDN1O60925 122 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 OR2J3O76001 311 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 IGLV1-40P01703 118 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 PRH1P02810 166 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 SLC25A4P12235 298 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 OPRK1P41145 380 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 RAB9AP51151 201 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 PAX9P55771 341 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 PROK1P58294 105 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 TPPP2P59282 170 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 RHOGP84095 191 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 ATP5G2Q06055 141 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 KRTAP24-1Q3LI83 254 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 AWAT1Q58HT5 328 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 C19orf54Q5BKX5 351 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 ETFRF1Q6IPR1 90 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 FAM223AQ8IWN6 122 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 TCTE3Q8IZS6 198 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 INO80EQ8NBZ0 244 aaPredicted RBP6.09□□□□□ -1.43
CDH1-208ENST00000565810 NECAP1Q8NC96 275 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms