RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
COMMD4-212ENST00000565517 VN1R17PQ8TDU5 208 aa11.79□□□□□ -0.52
COMMD4-212ENST00000565517 RRNAD1Q96FB5 475 aaKnown RBP11.79□□□□□ -0.52
COMMD4-212ENST00000565517 GALNT14Q96FL9 552 aa11.79□□□□□ -0.52
COMMD4-212ENST00000565517 CCDC140Q96MF4 163 aa11.79□□□□□ -0.52
COMMD4-212ENST00000565517 SRRQ9GZT4 340 aa11.79□□□□□ -0.52
COMMD4-212ENST00000565517 KCNIP3Q9Y2W7 256 aa11.79□□□□□ -0.52
COMMD4-212ENST00000565517 A0A0B4J293 547 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 MECP2P51608 486 aaKnown RBP11.78□□□□□ -0.52
COMMD4-212ENST00000565517 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 CLEC19AQ6UXS0 136 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 IL34Q6ZMJ4 242 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 GPHB5Q86YW7 130 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 OR2C3Q8N628 320 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 OR1P1Q8NH06 330 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 RBPMSQ93062 196 aaKnown RBP11.78□□□□□ -0.52
COMMD4-212ENST00000565517 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
COMMD4-212ENST00000565517 MFSD2BA6NFX1 497 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 PPP5D1E7EU14 171 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 INS-IGF2F8WCM5 200 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 IGLV1-51P01701 117 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 CLEC3BP05452 202 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 CSN3P07498 182 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 ARL3P36405 182 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 MFAP2P55001 183 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 ERHP84090 104 aaKnown RBP11.77□□□□□ -0.53
COMMD4-212ENST00000565517 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 DEFB121Q5J5C9 76 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 ZNF114Q8NC26 417 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 ZNF502Q8TBZ5 544 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 IL22RA2Q969J5 263 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
COMMD4-212ENST00000565517 SLC25A21Q9BQT8 299 aaPredicted RBP11.77□□□□□ -0.53
COMMD4-212ENST00000565517 LGALS9O00182 355 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 ST8SIA3O43173 380 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 OR2C1O95371 312 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 TMEM187Q14656 261 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 AARDQ4LEZ3 155 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 SELENOHQ8IZQ5 122 aaKnown RBP11.76□□□□□ -0.53
COMMD4-212ENST00000565517 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
COMMD4-212ENST00000565517 LHFPL5Q8TAF8 219 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 PRR25Q96S07 402 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 PLEKHA3Q9HB20 300 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 LSM4Q9Y4Z0 139 aaKnown RBP11.76□□□□□ -0.53
COMMD4-212ENST00000565517 S4R3C0 116 aa11.76□□□□□ -0.53
COMMD4-212ENST00000565517 A0A0G2JRQ6 117 aa11.75□□□□□ -0.53
COMMD4-212ENST00000565517 SPNP16150 400 aa11.75□□□□□ -0.53
COMMD4-212ENST00000565517 FAM106AQ4KMX7 169 aa11.75□□□□□ -0.53
COMMD4-212ENST00000565517 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
COMMD4-212ENST00000565517 OR52E5Q8NH55 327 aa11.75□□□□□ -0.53
COMMD4-212ENST00000565517 PDCD10Q9BUL8 212 aa11.75□□□□□ -0.53
COMMD4-212ENST00000565517 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-212ENST00000565517 PIGBOS1A0A0B4J2F0 54 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 NAP1L6A6NFF2 107 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 K7EIM0 57 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 LY86O95711 162 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 IFNA17P01571 189 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 HLA-AP01891 365 aaKnown RBP11.74□□□□□ -0.53
COMMD4-212ENST00000565517 ANXA3P12429 323 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 GP9P14770 177 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 AKR1C4P17516 323 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 SUPT4H1P63272 117 aaKnown RBP11.74□□□□□ -0.53
COMMD4-212ENST00000565517 BAK1Q16611 211 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 TMEM128Q5BJH2 165 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 TRIQKQ629K1 86 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 ZNF57Q68EA5 555 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-212ENST00000565517 SPSB3Q6PJ21 355 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 Q6ZRM9 215 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 SLC35G3Q8N808 338 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 SCARB1Q8WTV0 552 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 SDHCQ99643 169 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-212ENST00000565517 CACFD1Q9UGQ2 172 aa11.74□□□□□ -0.53
COMMD4-212ENST00000565517 GPR183P32249 361 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 INPP1P49441 399 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 SPCS3P61009 180 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 SRPXP78539 464 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 PLET1Q6UQ28 207 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 LINC00299Q6ZSB3 139 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 OR2K2Q8NGT1 345 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 GPR146Q96CH1 333 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 BSCL2Q96G97 398 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-212ENST00000565517 GAR1Q9NY12 217 aaKnown RBP11.73□□□□□ -0.53
COMMD4-212ENST00000565517 C21orf62Q9NYP8 219 aa11.73□□□□□ -0.53
COMMD4-212ENST00000565517 A0A0B4J2A0 478 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 C2orf70A6NJV1 201 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 A8MWP6 167 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 TGOLN2O43493 480 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 FCGR2BP31994 310 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-212ENST00000565517 SNCAP37840 140 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 SUB1P53999 127 aaKnown RBP eCLIP11.72□□□□□ -0.53
COMMD4-212ENST00000565517 RBMS2Q15434 407 aaKnown RBP11.72□□□□□ -0.53
COMMD4-212ENST00000565517 PVRIGQ6DKI7 326 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 LGI3Q8N145 548 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 TXN2Q99757 166 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 B9D2Q9BPU9 175 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-212ENST00000565517 ENY2Q9NPA8 101 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 225.5 ms