RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 LYSMD2Q8IV50 215 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 SLC38A6Q8IZM9 456 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 OR1L8Q8NGR8 309 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 FCAMRQ8WWV6 532 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 MOB3AQ96BX8 217 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 S100A16Q96FQ6 103 aaKnown RBP6.35□□□□□ -1.39
CAPN3-213ENST00000565173 ATP6V0BQ99437 205 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 DAZ1Q9NQZ3 744 aaKnown RBP6.35□□□□□ -1.39
CAPN3-213ENST00000565173 NSG2Q9Y328 171 aa6.35□□□□□ -1.39
CAPN3-213ENST00000565173 F11RQ9Y624 299 aaKnown RBP6.35□□□□□ -1.39
CAPN3-213ENST00000565173 HECTD4Q9Y4D8 3996 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 IGHV3OR16-8A0A075B7F1 116 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 IGHV3-21A0A0B4J1V1 117 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 KIR2DL5BA0A0G2JN68 375 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 KIR2DL5BA0A0G2JPC4 375 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 DBX1A6NMT0 343 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 C15orf62A8K5M9 175 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 UBE2CO00762 179 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 HPGDSO60760 199 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 KRASP01116 189 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 PMP2P02689 132 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 RLN1P04808 185 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 CTSGP08311 255 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 ATF4P18848 351 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-213ENST00000565173 G6PCP35575 357 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 LPAR6P43657 344 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 APOC4P55056 127 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 HERV-K104P61576 105 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 PMS2P11Q13670 270 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 DEFB135Q30KP9 77 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 CEMP1Q6PRD7 247 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-213ENST00000565173 KIR2DL5AQ8N109 375 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 KIR2DL5BQ8NHK3 375 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 DYNC2LI1Q8TCX1 351 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 RNF183Q96D59 192 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 DGCR14Q96DF8 476 aaKnown RBP6.34□□□□□ -1.39
CAPN3-213ENST00000565173 ZNF2Q9BSG1 426 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-213ENST00000565173 TMEM14BQ9NUH8 114 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 EHFQ9NZC4 300 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 RSL24D1Q9UHA3 163 aaKnown RBP6.34□□□□□ -1.39
CAPN3-213ENST00000565173 SMPXQ9UHP9 88 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 OR51B2Q9Y5P1 312 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 DNAH6Q9C0G6 4158 aa6.34□□□□□ -1.39
CAPN3-213ENST00000565173 DNAH2Q9P225 4427 aa6.34□□□□□ -1.4
CAPN3-213ENST00000565173 CXorf65A6NEN9 183 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 NUPR2A6NF83 97 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 FAM25AB3EWG3 89 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 FAM25CB3EWG5 89 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 FAM25GB3EWG6 89 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 RGS5O15539 181 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 CYB5BO43169 146 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 ZNF207O43670 478 aaKnown RBP6.33□□□□□ -1.4
CAPN3-213ENST00000565173 LY6G6CO95867 125 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 APOA1P02647 267 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 EIF4EP06730 217 aaKnown RBP6.33□□□□□ -1.4
CAPN3-213ENST00000565173 CTSDP07339 412 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-213ENST00000565173 TMEM69Q5SWH9 247 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 LAMTOR1Q6IAA8 161 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 BORCS5Q969J3 196 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 LSM10Q969L4 123 aaKnown RBP6.33□□□□□ -1.4
CAPN3-213ENST00000565173 RNF2Q99496 336 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 RBM38Q9H0Z9 239 aaKnown RBP6.33□□□□□ -1.4
CAPN3-213ENST00000565173 MAP6D1Q9H9H5 199 aa6.33□□□□□ -1.4
CAPN3-213ENST00000565173 CCDC59Q9P031 241 aaKnown RBP6.33□□□□□ -1.4
CAPN3-213ENST00000565173 FAT2Q9NYQ8 4349 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 SMIM31A0A1B0GVY4 71 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 I3L2K1 104 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 GPR31O00270 319 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 CHEK1O14757 476 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 IGKV1-39P01597 117 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 IGKV1D-39P04432 117 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 RPL35AP18077 110 aaKnown RBP6.32□□□□□ -1.4
CAPN3-213ENST00000565173 ELK1P19419 428 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 FCGR2BP31994 310 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-213ENST00000565173 TAS2R20P59543 309 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 ERVK-16P61578 105 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 ZNF124Q15973 351 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 APRG1Q8IVJ8 170 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 STPG3Q8N7X2 389 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 UBAC2Q8NBM4 344 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 OR6F1Q8NGZ6 308 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 OR1P1Q8NH06 330 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 OR5B3Q8NH48 314 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 OR10C1Q96KK4 312 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 CMTM3Q96MX0 182 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 C20orf24Q9BUV8 137 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 HINT2Q9BX68 163 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 C6orf62Q9GZU0 229 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-213ENST00000565173 FXYD6Q9H0Q3 95 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 IFT46Q9NQC8 304 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 NDUFA13Q9P0J0 144 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 PRNDQ9UKY0 176 aa6.32□□□□□ -1.4
CAPN3-213ENST00000565173 IGHV7-4-1A0A0J9YVY3 117 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 OR4C46A6NHA9 309 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 C15orf61A6NNL5 157 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 ZNF701M0R085 212 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-213ENST00000565173 CTDSP2O14595 271 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 SNAPC5O75971 98 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms