RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 GNB1P62873 340 aa15.63■□□□□ 0.09
CLN6-205ENST00000564846 ARSJQ5FYB0 599 aaPredicted RBP15.63■□□□□ 0.09
CLN6-205ENST00000564846 PIP4P2Q8N4L2 257 aa15.63■□□□□ 0.09
CLN6-205ENST00000564846 Q8N6K4 173 aa15.63■□□□□ 0.09
CLN6-205ENST00000564846 FBN2P35556 2912 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 WNK2Q9Y3S1 2297 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 TRAV20A0A0B4J274 112 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 IGLC7A0M8Q6 106 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 KRBOX1C9JBD0 128 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 MBP02144 154 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 TMEM41BQ5BJD5 291 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 LFNGQ8NES3 379 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 RNASEH2CQ8TDP1 164 aaKnown RBP15.62■□□□□ 0.09
CLN6-205ENST00000564846 SRSF8Q9BRL6 282 aaKnown RBP15.62■□□□□ 0.09
CLN6-205ENST00000564846 ASH1LQ9NR48 2969 aaKnown RBP15.62■□□□□ 0.09
CLN6-205ENST00000564846 RPRMQ9NS64 109 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 A0A096LNT2 108 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 IGHV1-69DA0A0B4J2H0 117 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 IGHV1-69P01742 117 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 C5orf64Q2M2E5 130 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 ZNF114Q8NC26 417 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 CACNG8Q8WXS5 425 aa15.62■□□□□ 0.09
CLN6-205ENST00000564846 BTBD17A6NE02 478 aa15.61■□□□□ 0.09
CLN6-205ENST00000564846 FCN1O00602 326 aa15.61■□□□□ 0.09
CLN6-205ENST00000564846 ZP3P21754 424 aa15.61■□□□□ 0.09
CLN6-205ENST00000564846 GPX4P36969 197 aaPredicted RBP15.61■□□□□ 0.09
CLN6-205ENST00000564846 ELLP55199 621 aaPredicted RBP15.61■□□□□ 0.09
CLN6-205ENST00000564846 TEPPQ6URK8 271 aa15.61■□□□□ 0.09
CLN6-205ENST00000564846 SRSF12Q8WXF0 261 aaKnown RBP15.61■□□□□ 0.09
CLN6-205ENST00000564846 MBD6Q96DN6 1003 aa15.61■□□□□ 0.09
CLN6-205ENST00000564846 P2RX4Q99571 388 aa15.61■□□□□ 0.09
CLN6-205ENST00000564846 C7orf69Q9H7B7 122 aa15.61■□□□□ 0.09
CLN6-205ENST00000564846 HIF1ANQ9NWT6 349 aa15.61■□□□□ 0.09
CLN6-205ENST00000564846 LSM4Q9Y4Z0 139 aaKnown RBP15.61■□□□□ 0.09
CLN6-205ENST00000564846 AGPAT2O15120 278 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 HBE1P02100 147 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 TMEM11P17152 192 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 RAB2AP61019 212 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 SSBP2P81877 361 aaPredicted RBP15.6■□□□□ 0.09
CLN6-205ENST00000564846 AKR1C1Q04828 323 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 CD69Q07108 199 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 RAB31Q13636 194 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 LINC01356Q8N9X3 169 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 VSIRQ9H7M9 311 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 KCNIP2Q9NS61 270 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 ABCA2Q9BZC7 2435 aa15.6■□□□□ 0.09
CLN6-205ENST00000564846 TRAV40A0A0B4J280 105 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 TEX22C9J3V5 150 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 OPRK1P41145 380 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 LOXL1Q08397 574 aaPredicted RBP15.59■□□□□ 0.09
CLN6-205ENST00000564846 FFAR4Q5NUL3 377 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 ACSM6Q6P461 480 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 MGST2Q99735 147 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 C1RLQ9NZP8 487 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 TRAV1-1A0A0B4J248 108 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 CNIH1O95406 144 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 FBLN7Q53RD9 439 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 PVRIGQ6DKI7 326 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 TMEM144Q7Z5S9 345 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 BPIFCQ8NFQ6 507 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 SFT2D1Q8WV19 159 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 LINC00052Q96N35 136 aa15.59■□□□□ 0.09
CLN6-205ENST00000564846 NCBP2LA6PVI3 153 aaKnown RBP15.58■□□□□ 0.08
CLN6-205ENST00000564846 REG1AP05451 166 aa15.58■□□□□ 0.08
CLN6-205ENST00000564846 SPSB3Q6PJ21 355 aa15.58■□□□□ 0.08
CLN6-205ENST00000564846 MBD3L1Q8WWY6 194 aa15.58■□□□□ 0.08
CLN6-205ENST00000564846 GGTLC1Q9BX51 225 aa15.58■□□□□ 0.08
CLN6-205ENST00000564846 VPS13CQ709C8 3753 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 AREGP15514 252 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 SRSF3P84103 164 aaKnown RBP15.57■□□□□ 0.08
CLN6-205ENST00000564846 ACOT6Q3I5F7 207 aaPredicted RBP15.57■□□□□ 0.08
CLN6-205ENST00000564846 Q5PR19 223 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 RUSC1-AS1Q66K80 236 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 OR1P1Q8NH06 330 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 RCC1LQ96I51 464 aaKnown RBP15.57■□□□□ 0.08
CLN6-205ENST00000564846 NARS2Q96I59 477 aaKnown RBP15.57■□□□□ 0.08
CLN6-205ENST00000564846 PTPN13Q12923 2485 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 M6PRP20645 277 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 GAMTQ14353 236 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 FXYD3Q14802 87 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 FAM120AOSQ5T036 256 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 PRSS57Q6UWY2 283 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 ZNF562Q6V9R5 426 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 SLC16A13Q7RTY0 426 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 RPP25LQ8N5L8 163 aaKnown RBP15.57■□□□□ 0.08
CLN6-205ENST00000564846 OR10G4Q8NGN3 311 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 OR10G9Q8NGN4 311 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 OR10G7Q8NGN6 311 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 SSMEM1Q8WWF3 244 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 SLC35E1Q96K37 410 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 PBDC1Q9BVG4 233 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 TREM1Q9NP99 234 aa15.57■□□□□ 0.08
CLN6-205ENST00000564846 TENM4Q6N022 2769 aa15.56■□□□□ 0.08
CLN6-205ENST00000564846 TMEM218A2RU14 115 aa15.56■□□□□ 0.08
CLN6-205ENST00000564846 CORTO00230 105 aa15.56■□□□□ 0.08
CLN6-205ENST00000564846 CD5P06127 495 aa15.56■□□□□ 0.08
CLN6-205ENST00000564846 ZNF726P1Q15940 193 aa15.56■□□□□ 0.08
CLN6-205ENST00000564846 F11RQ9Y624 299 aaKnown RBP15.56■□□□□ 0.08
CLN6-205ENST00000564846 ANKRD17O75179 2603 aaKnown RBP15.55■□□□□ 0.08
CLN6-205ENST00000564846 CELSR2Q9HCU4 2923 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms