RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 DNAH3Q8TD57 4116 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 IGLV11-55A0A075B6I3 123 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 CRYM-AS1A6NIL9 109 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 K7EIL1 84 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 LY86O95711 162 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 IGKV1-5P01602 117 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 HSPE1P61604 102 aaKnown RBP7.62□□□□□ -1.19
CDH1-206ENST00000564676 DHODHQ02127 395 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 WT1-ASQ06250 92 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 KLF5Q13887 457 aaPredicted RBP7.62□□□□□ -1.19
CDH1-206ENST00000564676 IZUMO4Q1ZYL8 232 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 ZNF57Q68EA5 555 aaPredicted RBP7.62□□□□□ -1.19
CDH1-206ENST00000564676 SGPP2Q8IWX5 399 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 CXorf58Q96LI9 332 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 PDCD10Q9BUL8 212 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 SRRQ9GZT4 340 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 KCNIP3Q9Y2W7 256 aa7.62□□□□□ -1.19
CDH1-206ENST00000564676 MEGF8Q7Z7M0 2845 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 PPP5D1E7EU14 171 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 BMPR1BO00238 502 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 IFNA17P01571 189 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 AKR1C4P17516 323 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 ARL3P36405 182 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 ERHP84090 104 aaKnown RBP7.61□□□□□ -1.19
CDH1-206ENST00000564676 KLK9Q2XQG4 91 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 TRIQKQ629K1 86 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 CLEC19AQ6UXS0 136 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 OR9G4Q8NGQ1 327 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 OR1L6Q8NGR2 347 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 GLYATL2Q8WU03 294 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 PRR25Q96S07 402 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 TMEM222Q9H0R3 208 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 PLEKHA3Q9HB20 300 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 KLK9Q9UKQ9 250 aa7.61□□□□□ -1.19
CDH1-206ENST00000564676 TRBV7-1A0A0A6YYK4 115 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 A0A0B4J293 547 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 MFSD2BA6NFX1 497 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 GGCTO75223 188 aaKnown RBP7.6□□□□□ -1.19
CDH1-206ENST00000564676 OR2C1O95371 312 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 CDS2O95674 445 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 HLA-AP01891 365 aaKnown RBP7.6□□□□□ -1.19
CDH1-206ENST00000564676 CLEC3BP05452 202 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 P0C879 139 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 PRCDQ00LT1 54 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 SPINK9Q5DT21 86 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 TMEM268Q5VZI3 342 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 TMED4Q7Z7H5 227 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 FAM219AQ8IW50 185 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 SELENOHQ8IZQ5 122 aaKnown RBP7.6□□□□□ -1.19
CDH1-206ENST00000564676 OR2C3Q8N628 320 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 SLC35G3Q8N808 338 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 DEDD2Q8WXF8 326 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 RBPMSQ93062 196 aaKnown RBP7.6□□□□□ -1.19
CDH1-206ENST00000564676 TMEM230Q96A57 120 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 CCDC140Q96MF4 163 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 ENY2Q9NPA8 101 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 PEMTQ9UBM1 199 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 ZNF256Q9Y2P7 627 aaPredicted RBP7.6□□□□□ -1.19
CDH1-206ENST00000564676 DMRT1Q9Y5R6 373 aa7.6□□□□□ -1.19
CDH1-206ENST00000564676 F11RQ9Y624 299 aaKnown RBP7.6□□□□□ -1.19
CDH1-206ENST00000564676 PRKDCP78527 4128 aaKnown RBP7.6□□□□□ -1.19
CDH1-206ENST00000564676 IGHV3-21A0A0B4J1V1 117 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 LINC00854A0A1B0GVQ3 168 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 ST8SIA3O43173 380 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 ANXA3P12429 323 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 SPNP16150 400 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 GPR183P32249 361 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 MFAP2P55001 183 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 DCTN2Q13561 401 aaKnown RBP7.59□□□□□ -1.19
CDH1-206ENST00000564676 TMEM187Q14656 261 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 BAK1Q16611 211 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 HAPLN4Q86UW8 402 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 OR1P1Q8NH06 330 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 LHFPL5Q8TAF8 219 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 ZNF502Q8TBZ5 544 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 VN1R17PQ8TDU5 208 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 MISP3Q96FF7 219 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 GALNT14Q96FL9 552 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 SLC25A21Q9BQT8 299 aaPredicted RBP7.59□□□□□ -1.19
CDH1-206ENST00000564676 ZC4H2Q9NQZ6 224 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.59□□□□□ -1.19
CDH1-206ENST00000564676 PRR13Q9NZ81 148 aa7.59□□□□□ -1.19
CDH1-206ENST00000564676 A0A0G2JRQ6 117 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 ZNF320A2RRD8 509 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 CSN3P07498 182 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 SNCAP37840 140 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 HOXA1P49639 335 aaPredicted RBP7.58□□□□□ -1.2
CDH1-206ENST00000564676 FAM106AQ4KMX7 169 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 PLET1Q6UQ28 207 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 IL34Q6ZMJ4 242 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 Q6ZRM9 215 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 GPHB5Q86YW7 130 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 LGI3Q8N145 548 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 SCARB1Q8WTV0 552 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 IL22RA2Q969J5 263 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 GPR146Q96CH1 333 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 C21orf62Q9NYP8 219 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 CACNG5Q9UF02 275 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 TMEM56-RWDD3S4R434 201 aa7.58□□□□□ -1.2
CDH1-206ENST00000564676 NAP1L6A6NFF2 107 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms