RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 VPS25Q9BRG1 176 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 OR11A1Q9GZK7 315 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 NXF2Q9GZY0 626 aaKnown RBP1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 NAA50Q9GZZ1 169 aaKnown RBP1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 MIXL1Q9H2W2 232 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 TMEM38AQ9H6F2 299 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 RPF2Q9H7B2 306 aaKnown RBP1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 CXorf21Q9HAI6 301 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 EXOSC4Q9NPD3 245 aaKnown RBP1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 ISYNA1Q9NPH2 558 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 IFT46Q9NQC8 304 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 TMEM106BQ9NUM4 274 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 FAM206AQ9NX38 181 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 SIGLEC8Q9NYZ4 499 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 COMMD9Q9P000 198 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 MED11Q9P086 117 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 COPZ2Q9P299 210 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 LGALS13Q9UHV8 139 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 APLNQ9ULZ1 77 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 COPS3Q9UNS2 423 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 SNX24Q9Y343 169 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 AK6Q9Y3D8 172 aaKnown RBP1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 LSM5Q9Y4Y9 91 aaKnown RBP1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 OARD1Q9Y530 152 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 HEY1Q9Y5J3 304 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 TMEM56-RWDD3S4R434 201 aa1.19□□□□□ -2.22
SUB1P3-201ENST00000564581 LRP1Q07954 4544 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 BORCS7-ASMTA0A0B4J1R7 106 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 A0A1B0GV90 55 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 TCRBV9S1A1TA0A576 114 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 DAPL1A0PJW8 107 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 PRORSD1PA6NEY8 169 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 SMIM9A6NGZ8 99 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 OR5B21A6NL26 309 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 CLDN24A6NM45 220 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 CEACAM18A8MTB9 384 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 EVPLLA8MZ36 301 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 C5orf58C9J3I9 102 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 C12orf77C9JDV5 145 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 C11orf94C9JXX5 98 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 G3V2T6 193 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 K7EN84 100 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 K7ERU9 68 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 GPR31O00270 319 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 AZIN1O14977 448 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 NPFFO15130 113 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 DLEU1O43261 78 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 EFNA2O43921 213 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 PDE6DO43924 150 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 MFSD11O43934 449 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 MPZL2O60487 215 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 GGCTO75223 188 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 OR7A10O76100 309 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 ATG12O94817 140 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 S1PR2O95136 353 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 GADD45GO95257 159 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 SOX14O95416 240 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 TTC4O95801 387 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 HAND1O96004 215 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 CA1P00915 261 aaPredicted RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 IGHG4P01861 327 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 CLPSP04118 112 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 MRPL3P09001 348 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 METTL15P1P0C7V9 234 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 MPC1LP0DKB6 136 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 SULT1A3P0DMM9 295 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 SULT1A4P0DMN0 295 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 P0DMU3 169 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 FAM231AP0DMU4 169 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 FAM231CP0DMU5 169 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 OR13C7P0DN81 318 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 SPNP16150 400 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 ZNF14P17017 642 aaPredicted RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 ATP5A1P25705 553 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 IMPA1P29218 277 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 CASP1P29466 404 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 FGF9P31371 208 aaPredicted RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 RPL22P35268 128 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 HRH1P35367 487 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 GPX4P36969 197 aaPredicted RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 IFNGR2P38484 337 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 CEACAM6P40199 344 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 MAP2K4P45985 399 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 UBE2E1P51965 193 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 CRISP1P54107 249 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 BIDP55957 195 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 TCL1AP56279 114 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 KLF3P57682 345 aaPredicted RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 TAS2R31P59538 309 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 KRTAP12-3P60328 96 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 RPS20P60866 119 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 UBE2MP61081 183 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 NAA20P61599 178 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 NUTF2P61970 127 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 RPL31P62899 125 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 GNG3P63215 75 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 PAFAH1B2P68402 229 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 HIST1H3AP68431 136 aa1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 MRPS10P82664 201 aaKnown RBP1.18□□□□□ -2.22
SUB1P3-201ENST00000564581 HPCAP84074 193 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms