RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 MRPL51Q4U2R6 128 aaKnown RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 SFXN4Q6P4A7 337 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ZNF664Q8N3J9 261 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 SMIM20Q8N5G0 67 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 OR10P1Q8NGE3 313 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 MS4A6EQ96DS6 147 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 BTF3L4Q96K17 158 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 LCE3DQ9BYE3 92 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 PCYT1BQ9Y5K3 369 aaPredicted RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 MBD5Q9P267 1494 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 A0A1B0GV90 55 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 GSTZ1O43708 216 aaPredicted RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 REG1AP05451 166 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 IFI30P13284 250 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 HIST1H1TP22492 207 aaPredicted RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 S100GP29377 79 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 KRTAP10-8P60410 259 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 RAB5BP61020 215 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 HIST1H3AP68431 136 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 H3F3AP84243 136 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 DEFA6Q01524 100 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 EMX1Q04741 257 aaPredicted RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 ZNF141Q15928 474 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 PLPPR5Q32ZL2 321 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 SMIM21Q3B7S5 101 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 OR10K2Q6IF99 312 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 C4orf22Q6V702 233 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 SDIM1Q6ZPB5 146 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 HIST2H3AQ71DI3 136 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 LY6G5BQ8NDX9 201 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 OR8J3Q8NGG0 315 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 OR1L8Q8NGR8 309 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 OR4X1Q8NH49 305 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 SLC25A44Q96H78 314 aaPredicted RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 PFDN5Q99471 154 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 TBX5Q99593 518 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 C12orf57Q99622 126 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 SIGMAR1Q99720 223 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 CMSS1Q9BQ75 279 aaKnown RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 TM2D3Q9BRN9 247 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 DCSTAMPQ9H295 470 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 NMNAT1Q9HAN9 279 aaPredicted RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 ANGPT4Q9Y264 503 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 CARHSP1Q9Y2V2 147 aaKnown RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 LSM5Q9Y4Y9 91 aaKnown RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 PIK3C2GO75747 1445 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 NSD3Q9BZ95 1437 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 PKD1L2Q7Z442 2459 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 PTPRJQ12913 1337 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 PPIP5K1Q6PFW1 1433 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 A0A1W2PNN7 141 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 IGSF23A1L1A6 192 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 A8MWP6 167 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 EEF1E1O43324 174 aaKnown RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 PSCAO43653 123 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 OGNP20774 298 aaKnown RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 S100PP25815 95 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 TCTAP57738 103 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 IFITM2Q01629 132 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 GRINAQ7Z429 371 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 C1orf158Q8N1D5 194 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 TMEM86BQ8N661 226 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 TVP23CQ96ET8 276 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 PKMYT1Q99640 499 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 KIFC1Q9BW19 673 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 OR51I2Q9H344 312 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 SMDT1Q9H4I9 107 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 C11orf1Q9H5F2 150 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 SPANXA1Q9NS26 97 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 KLK5Q9Y337 293 aaPredicted RBP1.32□□□□□ -2.2
CHD9-209ENST00000564255 PRELID3BQ9Y3B1 194 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 DUOX2Q9NRD8 1548 aa1.32□□□□□ -2.2
CHD9-209ENST00000564255 NEBP20929 6669 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 ERBINQ96RT1 1412 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 TOPAZ1Q8N9V7 1692 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 LCTP09848 1927 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 EXOC1LA0A1B0GW35 172 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 EVPLLA8MZ36 301 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 SYNGR2O43760 224 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 SULT1C4O75897 302 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 SERPINA7P05543 415 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 OR10J4P0C629 311 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 GPX2P18283 190 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 CCL1P22362 96 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 CA5AP35218 305 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 SURF2Q15527 256 aaPredicted RBP1.31□□□□□ -2.2
CHD9-209ENST00000564255 FAM78BQ5VT40 261 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 RASSF6Q6ZTQ3 369 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 ZNF550Q7Z398 422 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 ANGPTL5Q86XS5 388 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 C1orf174Q8IYL3 243 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 LINC00304Q8N9R0 145 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 SKA2Q8WVK7 121 aaPredicted RBP1.31□□□□□ -2.2
CHD9-209ENST00000564255 SLC35G5Q96KT7 338 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 PPP1R2P1Q96PQ5 205 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 GINS3Q9BRX5 216 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 NKX6-2Q9C056 277 aaPredicted RBP1.31□□□□□ -2.2
CHD9-209ENST00000564255 TPT1P8Q9HAU6 139 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 LRTM1Q9HBL6 345 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 RASL12Q9NYN1 266 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms