RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TEX29Q8N6K0 151 aa17.45■□□□□ 0.38
LINC01960-201ENST00000563759 TMEM170AQ8WVE7 144 aa17.45■□□□□ 0.38
LINC01960-201ENST00000563759 RBM14Q96PK6 669 aaKnown RBP17.45■□□□□ 0.38
LINC01960-201ENST00000563759 MOB4Q9Y3A3 225 aa17.45■□□□□ 0.38
LINC01960-201ENST00000563759 SONP18583 2426 aaKnown RBP17.45■□□□□ 0.38
LINC01960-201ENST00000563759 IGLC7A0M8Q6 106 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 CD5LO43866 347 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 REG1AP05451 166 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 LY6EQ16553 131 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 SLC25A24Q6NUK1 477 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 ABHD5Q8WTS1 349 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 SSMEM1Q8WWF3 244 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 ZNF562Q6V9R5 426 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 C9orf139Q6ZV77 190 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 PHYHIPLQ96FC7 376 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 PITPNC1Q9UKF7 332 aa17.44■□□□□ 0.38
LINC01960-201ENST00000563759 FLNBO75369 2602 aaKnown RBP17.43■□□□□ 0.38
LINC01960-201ENST00000563759 TEX22C9J3V5 150 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 IFNA5P01569 189 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 HLA-DRB1P01911 266 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 RNASE2P10153 161 aaKnown RBP17.43■□□□□ 0.38
LINC01960-201ENST00000563759 ATP5IP56385 69 aaPredicted RBP17.43■□□□□ 0.38
LINC01960-201ENST00000563759 CX3CL1P78423 397 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 KRTAP1-1Q07627 177 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 BSXQ3C1V8 233 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 C2orf83Q53S99 150 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 SPNS3Q6ZMD2 512 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 HSD17B13Q7Z5P4 300 aaPredicted RBP17.43■□□□□ 0.38
LINC01960-201ENST00000563759 HSD17B11Q8NBQ5 300 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 ARPC1AQ92747 370 aa17.43■□□□□ 0.38
LINC01960-201ENST00000563759 MXRA5Q9NR99 2828 aa17.42■□□□□ 0.38
LINC01960-201ENST00000563759 UBE2L5PA0A1B0GUS4 154 aa17.42■□□□□ 0.38
LINC01960-201ENST00000563759 AREGP15514 252 aa17.42■□□□□ 0.38
LINC01960-201ENST00000563759 SUB1P53999 127 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC01960-201ENST00000563759 ATP6V1FQ16864 119 aa17.42■□□□□ 0.38
LINC01960-201ENST00000563759 TUSC1Q2TAM9 212 aa17.42■□□□□ 0.38
LINC01960-201ENST00000563759 SCARB1Q8WTV0 552 aa17.42■□□□□ 0.38
LINC01960-201ENST00000563759 FAM103A1Q9BTL3 118 aaKnown RBP17.42■□□□□ 0.38
LINC01960-201ENST00000563759 TMEM147Q9BVK8 224 aa17.42■□□□□ 0.38
LINC01960-201ENST00000563759 IL17RELQ6ZVW7 336 aa17.41■□□□□ 0.38
LINC01960-201ENST00000563759 C5orf56Q8N8D9 126 aa17.41■□□□□ 0.38
LINC01960-201ENST00000563759 TMED6Q8WW62 240 aa17.41■□□□□ 0.38
LINC01960-201ENST00000563759 UQCC1Q9NVA1 299 aa17.41■□□□□ 0.38
LINC01960-201ENST00000563759 FGF16O43320 207 aa17.41■□□□□ 0.38
LINC01960-201ENST00000563759 EIF5AL1Q6IS14 154 aaKnown RBP17.41■□□□□ 0.38
LINC01960-201ENST00000563759 SRSF8Q9BRL6 282 aaKnown RBP17.41■□□□□ 0.38
LINC01960-201ENST00000563759 A6NDX4 124 aa17.4■□□□□ 0.38
LINC01960-201ENST00000563759 FBXO24O75426 580 aa17.4■□□□□ 0.38
LINC01960-201ENST00000563759 NDPQ00604 133 aa17.4■□□□□ 0.38
LINC01960-201ENST00000563759 P2RX4Q99571 388 aa17.4■□□□□ 0.38
LINC01960-201ENST00000563759 GINS3Q9BRX5 216 aa17.4■□□□□ 0.38
LINC01960-201ENST00000563759 YAE1D1Q9NRH1 226 aa17.4■□□□□ 0.38
LINC01960-201ENST00000563759 OTOGQ6ZRI0 2925 aa17.4■□□□□ 0.38
LINC01960-201ENST00000563759 IGHV7-81A0A0B4J1V7 117 aa17.39■□□□□ 0.38
LINC01960-201ENST00000563759 PRSS46E5RG02 174 aa17.39■□□□□ 0.38
LINC01960-201ENST00000563759 HSPB9Q9BQS6 159 aa17.39■□□□□ 0.38
LINC01960-201ENST00000563759 ARV1Q9H2C2 271 aa17.39■□□□□ 0.38
LINC01960-201ENST00000563759 SMCO3A2RU48 225 aa17.39■□□□□ 0.37
LINC01960-201ENST00000563759 BTBD17A6NE02 478 aa17.39■□□□□ 0.37
LINC01960-201ENST00000563759 IGHV4-59P01825 116 aa17.39■□□□□ 0.37
LINC01960-201ENST00000563759 FAM74A1Q5RGS3 127 aa17.39■□□□□ 0.37
LINC01960-201ENST00000563759 ZNF114Q8NC26 417 aa17.39■□□□□ 0.37
LINC01960-201ENST00000563759 SCGB1C1Q8TD33 95 aa17.39■□□□□ 0.37
LINC01960-201ENST00000563759 BAHCC1Q9P281 2608 aa17.39■□□□□ 0.37
LINC01960-201ENST00000563759 SRP14P37108 136 aaKnown RBP17.38■□□□□ 0.37
LINC01960-201ENST00000563759 IER3P46695 156 aa17.38■□□□□ 0.37
LINC01960-201ENST00000563759 DLK1P80370 383 aa17.38■□□□□ 0.37
LINC01960-201ENST00000563759 GGACTQ9BVM4 153 aa17.38■□□□□ 0.37
LINC01960-201ENST00000563759 SH2D7A6NKC9 451 aaPredicted RBP17.37■□□□□ 0.37
LINC01960-201ENST00000563759 RUNX1Q01196 453 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 C16orf82Q7Z2V1 217 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 OR5R1Q8NH85 324 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 SH3BGRL3Q9H299 93 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 SLC25A32Q9H2D1 315 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 PARP11Q9NR21 331 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 M0QZK8 103 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 ATP6V0CP27449 155 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 VWC2Q2TAL6 325 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 C19orf35Q6ZS72 473 aa17.37■□□□□ 0.37
LINC01960-201ENST00000563759 WDR61Q9GZS3 305 aaKnown RBP17.37■□□□□ 0.37
LINC01960-201ENST00000563759 F11RQ9Y624 299 aaKnown RBP17.37■□□□□ 0.37
LINC01960-201ENST00000563759 SPP1P10451 314 aa17.36■□□□□ 0.37
LINC01960-201ENST00000563759 HNF1AP20823 631 aa17.36■□□□□ 0.37
LINC01960-201ENST00000563759 RAB14P61106 215 aa17.36■□□□□ 0.37
LINC01960-201ENST00000563759 OR1P1Q8NH06 330 aa17.36■□□□□ 0.37
LINC01960-201ENST00000563759 RNASEH2CQ8TDP1 164 aaKnown RBP17.36■□□□□ 0.37
LINC01960-201ENST00000563759 GNPNAT1Q96EK6 184 aaPredicted RBP17.36■□□□□ 0.37
LINC01960-201ENST00000563759 ZNF48Q96MX3 618 aaPredicted RBP17.36■□□□□ 0.37
LINC01960-201ENST00000563759 FBXO7Q9Y3I1 522 aa17.36■□□□□ 0.37
LINC01960-201ENST00000563759 DEFA4P12838 97 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 FGF7P21781 194 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 OPRK1P41145 380 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 Q6YL49 198 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 MISP3Q96FF7 219 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 PARD6GQ9BYG4 376 aaPredicted RBP17.35■□□□□ 0.37
LINC01960-201ENST00000563759 AMY1AP04745 511 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 SEC11BP0C7V7 166 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 AKR1C1Q04828 323 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 LFNGQ8NES3 379 aa17.35■□□□□ 0.37
LINC01960-201ENST00000563759 TNFRSF19Q9NS68 423 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms