RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TAS2R20P59543 309 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 DEFA1P59665 94 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 DEFA3P59666 94 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 ANKRD55Q3KP44 614 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 MMD2Q8IY49 270 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 OR4A4PQ8NGN8 299 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 OR5B3Q8NH48 314 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 CD300LFQ8TDQ1 290 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 MARC2Q969Z3 335 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 GALNT14Q96FL9 552 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 S100A16Q96FQ6 103 aaKnown RBP7.53□□□□□ -1.2
SF3B3-204ENST00000563739 SLC2A9Q9NRM0 540 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 MRPL27Q9P0M9 148 aaKnown RBP7.53□□□□□ -1.2
SF3B3-204ENST00000563739 FAM25AB3EWG3 89 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 FAM25CB3EWG5 89 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 FAM25GB3EWG6 89 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 KBTBD11O94819 623 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 DIRAS3O95661 229 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 PTTG1O95997 202 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 RBMY1A1P0DJD3 496 aaKnown RBP7.52□□□□□ -1.21
SF3B3-204ENST00000563739 RBMY1CP0DJD4 496 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 RRASP10301 218 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 ELK1P19419 428 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 GPR183P32249 361 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 RPL27AP46776 148 aaKnown RBP7.52□□□□□ -1.21
SF3B3-204ENST00000563739 ELLP55199 621 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-204ENST00000563739 RBMY1FQ15415 496 aaKnown RBP7.52□□□□□ -1.21
SF3B3-204ENST00000563739 BAK1Q16611 211 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 RTL8BQ17RB0 113 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 FAM106AQ4KMX7 169 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 PYDC2Q56P42 97 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 OR4A47Q6IF82 309 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 H1FOOQ8IZA3 346 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-204ENST00000563739 TMEM167AQ8TBQ9 72 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 RARRES2Q99969 163 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
SF3B3-204ENST00000563739 IGHV4-4A0A075B6R2 117 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 IGKV1D-13A0A0B4J2D9 117 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 IGLC7A0M8Q6 106 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 IGLL5B9A064 214 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 HLA-DQB1P01920 261 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 CLEC3BP05452 202 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 CTSDP07339 412 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-204ENST00000563739 IGKV1-13P0DP09 117 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 PTHLHP12272 177 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 IL7P13232 177 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 ADMP35318 185 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 IL18Q14116 193 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 OR2B11Q5JQS5 317 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 Q6ZR54 194 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 RBPMS2Q6ZRY4 209 aaKnown RBP7.51□□□□□ -1.21
SF3B3-204ENST00000563739 Q6ZTC4 211 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 ZNF645Q8N7E2 425 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 OR11H2Q8NH07 326 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 EEF1AKMT3Q96AZ1 226 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 PPP1R14BQ96C90 147 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 CHRDL1Q9BU40 450 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 MFFQ9GZY8 342 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 EXTL2Q9UBQ6 330 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 TBC1D24Q9ULP9 559 aa7.51□□□□□ -1.21
SF3B3-204ENST00000563739 IGHV3OR16-8A0A075B7F1 116 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 PFDN1O60925 122 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 FCGR3BO75015 233 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 RPA2P15927 270 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 BCAP31P51572 246 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 ASAH1Q13510 395 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 SSX9Q7RTT3 188 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 SLC25A42Q86VD7 318 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 HOGA1Q86XE5 327 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 GPHA2Q96T91 129 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 GINS4Q9BRT9 223 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 CSTL1Q9H114 145 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 ANXA10Q9UJ72 324 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 ANAPC10Q9UM13 185 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 CELA1Q9UNI1 258 aa7.5□□□□□ -1.21
SF3B3-204ENST00000563739 ELOA3CA0A087WX78 387 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-204ENST00000563739 TRBV7-1A0A0A6YYK4 115 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 TRAV3A0A0B4J244 114 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 MEIS3P1A6NDR6 274 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 TGOLN2O43493 480 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 ZNF207O43670 478 aaKnown RBP7.49□□□□□ -1.21
SF3B3-204ENST00000563739 CBX5P45973 191 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 OR2B8PP59922 312 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 FAM90A2PQ658T7 463 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 SLC38A6Q8IZM9 456 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 FAM24BQ8N5W8 94 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 BEST4Q8NFU0 473 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 OR10J5Q8NHC4 309 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 ADTRPQ96IZ2 230 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 RNF2Q99496 336 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 HRH4Q9H3N8 390 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 SCPEP1Q9HB40 452 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 IFT46Q9NQC8 304 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 RABL2AQ9UBK7 228 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-204ENST00000563739 RABL2BQ9UNT1 228 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 UFC1Q9Y3C8 167 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 X6R8D5 127 aa7.49□□□□□ -1.21
SF3B3-204ENST00000563739 DMBT1Q9UGM3 2413 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-204ENST00000563739 IGHV4-28A0A0C4DH34 117 aa7.48□□□□□ -1.21
SF3B3-204ENST00000563739 MPTX1A8MV57 137 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms