RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 REG1AP05451 166 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 OR13C7P0DN81 318 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 RNASE2P10153 161 aaKnown RBP8.04□□□□□ -1.12
SMG1-208ENST00000563448 EGR2P11161 476 aaPredicted RBP8.04□□□□□ -1.12
SMG1-208ENST00000563448 M6PRP20645 277 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 HNF1AP20823 631 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 C16orf82Q7Z2V1 217 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 SLC24A4Q8NFF2 622 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 OR5R1Q8NH85 324 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 SSMEM1Q8WWF3 244 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 WFDC1Q9HC57 220 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 CYTL1Q9NRR1 136 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 TNFRSF19Q9NS68 423 aa8.04□□□□□ -1.12
SMG1-208ENST00000563448 SONP18583 2426 aaKnown RBP8.04□□□□□ -1.12
SMG1-208ENST00000563448 KANTRA0A1W2PQU2 76 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 LINC01548A6NM66 108 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 AREGP15514 252 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 NPY1RP25929 384 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 RPP30P78346 268 aaKnown RBP8.03□□□□□ -1.12
SMG1-208ENST00000563448 ERHP84090 104 aaKnown RBP8.03□□□□□ -1.12
SMG1-208ENST00000563448 BAXQ07812 192 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 ASPHD1Q5U4P2 390 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 STX12Q86Y82 276 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 TMEM217Q8N7C4 229 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 OR5C1Q8NGR4 320 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 ARPC1AQ92747 370 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 GON7Q9BXV9 100 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 GSX1Q9H4S2 264 aaPredicted RBP8.03□□□□□ -1.12
SMG1-208ENST00000563448 PRSS46E5RG02 174 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 OR8U8P0C7N1 319 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 HTR2BP41595 481 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 OR8G2PQ6IF36 304 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 C19orf35Q6ZS72 473 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 STPG2Q8N412 459 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 ABHD5Q8WTS1 349 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 P2RX4Q99571 388 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 SRSF8Q9BRL6 282 aaKnown RBP8.03□□□□□ -1.12
SMG1-208ENST00000563448 VPREB3Q9UKI3 123 aa8.03□□□□□ -1.12
SMG1-208ENST00000563448 MXRA5Q9NR99 2828 aa8.02□□□□□ -1.12
SMG1-208ENST00000563448 BTBD17A6NE02 478 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 C4BPBP20851 252 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 SNCAP37840 140 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 RAB11AP62491 216 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 BLCAPP62952 87 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 ETV3LQ6ZN32 361 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 Q71RC1 249 aaPredicted RBP8.02□□□□□ -1.13
SMG1-208ENST00000563448 OR1S2Q8NGQ3 325 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 M0QZK8 103 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 TAAR5O14804 337 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 ATP6V0E1O15342 81 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 MFAP2P55001 183 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 SLC38A11Q08AI6 406 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 CLINT1Q14677 625 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 RPL7L1Q6DKI1 246 aaKnown RBP8.02□□□□□ -1.13
SMG1-208ENST00000563448 Q6ZS46 218 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 HSD17B13Q7Z5P4 300 aaPredicted RBP8.02□□□□□ -1.13
SMG1-208ENST00000563448 ZNF114Q8NC26 417 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 OR10P1Q8NGE3 313 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 SGMS2Q8NHU3 365 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 ZNF471Q9BX82 626 aaPredicted RBP8.02□□□□□ -1.13
SMG1-208ENST00000563448 PARP11Q9NR21 331 aa8.02□□□□□ -1.13
SMG1-208ENST00000563448 IFNA4P05014 189 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 CTRB1P17538 263 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 ATP5IP56385 69 aaPredicted RBP8.01□□□□□ -1.13
SMG1-208ENST00000563448 HBG1P69891 147 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 HBG2P69892 147 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 SMUG1Q53HV7 270 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 C9orf152Q5JTZ5 239 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 PVRIGQ6DKI7 326 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 CTRB2Q6GPI1 263 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 SLC51BQ86UW2 128 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 IQCF2Q8IXL9 164 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 MRPL41Q8IXM3 137 aaKnown RBP8.01□□□□□ -1.13
SMG1-208ENST00000563448 LFNGQ8NES3 379 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 ATP5SQ99766 215 aa8.01□□□□□ -1.13
SMG1-208ENST00000563448 IGHG2P01859 326 aa8□□□□□ -1.13
SMG1-208ENST00000563448 CRYGCP07315 174 aa8□□□□□ -1.13
SMG1-208ENST00000563448 SUB1P53999 127 aaKnown RBP eCLIP8□□□□□ -1.13
SMG1-208ENST00000563448 LILRB2Q8N423 598 aa8□□□□□ -1.13
SMG1-208ENST00000563448 TTC9CQ8N5M4 171 aa8□□□□□ -1.13
SMG1-208ENST00000563448 TMEM86BQ8N661 226 aa8□□□□□ -1.13
SMG1-208ENST00000563448 DUX5Q96PT3 197 aa8□□□□□ -1.13
SMG1-208ENST00000563448 WNT10AQ9GZT5 417 aa8□□□□□ -1.13
SMG1-208ENST00000563448 CDC42EP3Q9UKI2 254 aa8□□□□□ -1.13
SMG1-208ENST00000563448 DMRT1Q9Y5R6 373 aa8□□□□□ -1.13
SMG1-208ENST00000563448 F11RQ9Y624 299 aaKnown RBP8□□□□□ -1.13
SMG1-208ENST00000563448 NPIPB5A8MRT5 1133 aa8□□□□□ -1.13
SMG1-208ENST00000563448 INAFM1C9JVW0 142 aa8□□□□□ -1.13
SMG1-208ENST00000563448 FBXO24O75426 580 aa8□□□□□ -1.13
SMG1-208ENST00000563448 SCAF4O95104 1147 aaKnown RBP8□□□□□ -1.13
SMG1-208ENST00000563448 CFDP00746 253 aaPredicted RBP8□□□□□ -1.13
SMG1-208ENST00000563448 SRD5A1P18405 259 aa8□□□□□ -1.13
SMG1-208ENST00000563448 MLANAQ16655 118 aa8□□□□□ -1.13
SMG1-208ENST00000563448 ECSCRQ19T08 205 aa8□□□□□ -1.13
SMG1-208ENST00000563448 OR1P1Q8NH06 330 aa8□□□□□ -1.13
SMG1-208ENST00000563448 STOML3Q8TAV4 291 aa8□□□□□ -1.13
SMG1-208ENST00000563448 SUN5Q8TC36 379 aa8□□□□□ -1.13
SMG1-208ENST00000563448 ST8SIA2Q92186 375 aa8□□□□□ -1.13
SMG1-208ENST00000563448 PINX1Q96BK5 328 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms