RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 OR1P1Q8NH06 330 aa10.59□□□□□ -0.71
SMPD3-204ENST00000563396 NEURL2Q9BR09 285 aa10.59□□□□□ -0.71
SMPD3-204ENST00000563396 C21orf62Q9NYP8 219 aa10.59□□□□□ -0.71
SMPD3-204ENST00000563396 MLXQ9UH92 298 aa10.59□□□□□ -0.71
SMPD3-204ENST00000563396 RYR3Q15413 4870 aa10.59□□□□□ -0.71
SMPD3-204ENST00000563396 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 INS-IGF2F8WCM5 200 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 CTDSP2O14595 271 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 CTDSPLO15194 276 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 RGS5O15539 181 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 IGKV1-5P01602 117 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 CD7P09564 240 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 PPP5CP53041 499 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 STEAP1BQ6NZ63 245 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 SPSB3Q6PJ21 355 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 PLET1Q6UQ28 207 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 H2BFWTQ7Z2G1 175 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 OR2C3Q8N628 320 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 SCARB1Q8WTV0 552 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 WDR89Q96FK6 387 aaPredicted RBP10.58□□□□□ -0.72
SMPD3-204ENST00000563396 ZNF414Q96IQ9 312 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 CITED4Q96RK1 184 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 TP53RKQ96S44 253 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 SPATA25Q9BR10 227 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 HINT2Q9BX68 163 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 PALMDQ9NP74 551 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 SLC2A8Q9NY64 477 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 RABL2AQ9UBK7 228 aaPredicted RBP10.58□□□□□ -0.72
SMPD3-204ENST00000563396 RABL2BQ9UNT1 228 aa10.58□□□□□ -0.72
SMPD3-204ENST00000563396 B3GALNT1O75752 331 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 RAB3DO95716 219 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 PGAM2P15259 253 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 PI3P19957 117 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 UCP1P25874 307 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 MEF2DQ14814 521 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 HAGHQ16775 308 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 ZNF57Q68EA5 555 aaPredicted RBP10.57□□□□□ -0.72
SMPD3-204ENST00000563396 SLC25A24Q6NUK1 477 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 CCDC71LQ8N9Z2 235 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 UXS1Q8NBZ7 420 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 OR13C8Q8NGS7 320 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 OR4A16Q8NH70 328 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 TERB2Q8NHR7 220 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 MUC7Q8TAX7 377 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 SLIRPQ9GZT3 109 aaKnown RBP10.57□□□□□ -0.72
SMPD3-204ENST00000563396 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 PLEKHA3Q9HB20 300 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 MRPL27Q9P0M9 148 aaKnown RBP10.57□□□□□ -0.72
SMPD3-204ENST00000563396 UFC1Q9Y3C8 167 aa10.57□□□□□ -0.72
SMPD3-204ENST00000563396 TRAV25A0A0B4J276 109 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 C3orf85A0A1B0GTC6 90 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 ZNF320A2RRD8 509 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 H3BMQ9 156 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 NDUFA4O00483 81 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 CTSDP07339 412 aaPredicted RBP10.56□□□□□ -0.72
SMPD3-204ENST00000563396 ADMP35318 185 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 RPL5P46777 297 aaKnown RBP10.56□□□□□ -0.72
SMPD3-204ENST00000563396 HSPE1P61604 102 aaKnown RBP10.56□□□□□ -0.72
SMPD3-204ENST00000563396 SURF2Q15527 256 aaPredicted RBP10.56□□□□□ -0.72
SMPD3-204ENST00000563396 TM4SF20Q53R12 229 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 BTNL8Q6UX41 500 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 ZFAND1Q8TCF1 268 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 DAZ1Q9NQZ3 744 aaKnown RBP10.56□□□□□ -0.72
SMPD3-204ENST00000563396 CEPT1Q9Y6K0 416 aa10.56□□□□□ -0.72
SMPD3-204ENST00000563396 I3L2K1 104 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 ATG12O94817 140 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 AKR1C2P52895 323 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 AARDQ4LEZ3 155 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 PVRIGQ6DKI7 326 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 FAAP20Q6NZ36 180 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 MARCH1Q8TCQ1 289 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 ISOC1Q96CN7 298 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 CHRDL1Q9BU40 450 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 TUBA4BQ9H853 241 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 GAR1Q9NY12 217 aaKnown RBP10.55□□□□□ -0.72
SMPD3-204ENST00000563396 COPZ2Q9P299 210 aa10.55□□□□□ -0.72
SMPD3-204ENST00000563396 STARD9Q9P2P6 4700 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 A0A0B4J293 547 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 GSTZ1O43708 216 aaPredicted RBP10.54□□□□□ -0.72
SMPD3-204ENST00000563396 GUCA2BQ16661 112 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 SCGB2B2Q4G0G5 96 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 SLC16A13Q7RTY0 426 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 OR4C16Q8NGL9 310 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 DIRAS2Q96HU8 199 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 TXN2Q99757 166 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 NXF2Q9GZY0 626 aaKnown RBP10.54□□□□□ -0.72
SMPD3-204ENST00000563396 C5orf66Q9H5L9 145 aa10.54□□□□□ -0.72
SMPD3-204ENST00000563396 IGHV3-21A0A0B4J1V1 117 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 IGHV3-35A0A0C4DH35 117 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 ANKRD20A5PA0PJZ0 165 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 C15orf62A8K5M9 175 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 OR11H12B2RN74 326 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 K7EMT4 169 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 NOL3O60936 208 aaKnown RBP10.53□□□□□ -0.72
SMPD3-204ENST00000563396 CTSGP08311 255 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 AKAIN1P0CW23 69 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 IL18Q14116 193 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms