RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 IGHV3-23P01764 117 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 HIST1H1BP16401 226 aaKnown RBP6.54□□□□□ -1.36
UBR1-204ENST00000563239 AKR1C4P17516 323 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 PRCDQ00LT1 54 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 SPINK9Q5DT21 86 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 TMEM268Q5VZI3 342 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 TRIQKQ629K1 86 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 IL34Q6ZMJ4 242 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 HSD17B13Q7Z5P4 300 aaPredicted RBP6.54□□□□□ -1.36
UBR1-204ENST00000563239 SGPP2Q8IWX5 399 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 OR2C3Q8N628 320 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 RBPMSQ93062 196 aaKnown RBP6.54□□□□□ -1.36
UBR1-204ENST00000563239 LSM10Q969L4 123 aaKnown RBP6.54□□□□□ -1.36
UBR1-204ENST00000563239 AURKAIP1Q9NWT8 199 aaPredicted RBP6.54□□□□□ -1.36
UBR1-204ENST00000563239 F11RQ9Y624 299 aaKnown RBP6.54□□□□□ -1.36
UBR1-204ENST00000563239 NAP1L6A6NFF2 107 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 PPP5D1E7EU14 171 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 F8W735 103 aaPredicted RBP6.53□□□□□ -1.36
UBR1-204ENST00000563239 INS-IGF2F8WCM5 200 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 ATG12O94817 140 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 NDUFB6O95139 128 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 DHFRP00374 187 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 DEFA4P12838 97 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 AKR1C2P52895 323 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 ANKRD55Q3KP44 614 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 PDLIM3Q53GG5 364 aaPredicted RBP6.53□□□□□ -1.36
UBR1-204ENST00000563239 TMEM128Q5BJH2 165 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 NMSQ5H8A3 153 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 C9orf66Q5T8R8 295 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 PVRIGQ6DKI7 326 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 ACSM6Q6P461 480 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 LYZL2Q7Z4W2 148 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 TMED4Q7Z7H5 227 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 FAM219AQ8IW50 185 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 SLC35G3Q8N808 338 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 ZNF502Q8TBZ5 544 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 IL22RA2Q969J5 263 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 ZNF414Q96IQ9 312 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 BATF3Q9NR55 127 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 PTTG2Q9NZH5 202 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 FLVCR2Q9UPI3 526 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 KCNIP3Q9Y2W7 256 aa6.53□□□□□ -1.36
UBR1-204ENST00000563239 WI2-2373I1.2A0A1W2PRP0 233 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 K7EIL1 84 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 K7EIM0 57 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 SFT2D2O95562 160 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 HLA-AP01891 365 aaKnown RBP6.52□□□□□ -1.37
UBR1-204ENST00000563239 ZP3P21754 424 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 MECP2P51608 486 aaKnown RBP6.52□□□□□ -1.37
UBR1-204ENST00000563239 SYNJ2BPP57105 145 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 PPP1R1AQ13522 171 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 RBMS2Q15434 407 aaKnown RBP6.52□□□□□ -1.37
UBR1-204ENST00000563239 C11orf87Q6NUJ2 197 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 SLC25A24Q6NUK1 477 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 CLEC19AQ6UXS0 136 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 ADAMTSL5Q6ZMM2 481 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 LRTM2Q8N967 370 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 ZNF114Q8NC26 417 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 OR1P1Q8NH06 330 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 RRNAD1Q96FB5 475 aaKnown RBP6.52□□□□□ -1.37
UBR1-204ENST00000563239 C7orf50Q9BRJ6 194 aaKnown RBP6.52□□□□□ -1.37
UBR1-204ENST00000563239 CCDC32Q9BV29 185 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 GPR61Q9BZJ8 451 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.52□□□□□ -1.37
UBR1-204ENST00000563239 PLA2G2EQ9NZK7 142 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 CACNG5Q9UF02 275 aa6.52□□□□□ -1.37
UBR1-204ENST00000563239 COL7A1Q02388 2944 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 TRBV7-1A0A0A6YYK4 115 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 IGHV3-21A0A0B4J1V1 117 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 A0A0B4J2A0 478 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 I3L2K1 104 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 OR2C1O95371 312 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 CLEC3BP05452 202 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 CSN3P07498 182 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 RNASE2P10153 161 aaKnown RBP6.51□□□□□ -1.37
UBR1-204ENST00000563239 EDN2P20800 178 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 INPP1P49441 399 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 SPCS3P61009 180 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 IFITM3Q01628 133 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 BSXQ3C1V8 233 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 LGI3Q8N145 548 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 CENPSQ8N2Z9 138 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 OR9G4Q8NGQ1 327 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 OR52E5Q8NH55 327 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 VN1R17PQ8TDU5 208 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 SCARB1Q8WTV0 552 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 S100ZQ8WXG8 99 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 EEF1AKMT3Q96AZ1 226 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 CXorf58Q96LI9 332 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 PLEKHA3Q9HB20 300 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 SHPKQ9UHJ6 478 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 TBC1D24Q9ULP9 559 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 DNAH9Q9NYC9 4486 aa6.51□□□□□ -1.37
UBR1-204ENST00000563239 C9orf170A2RU37 121 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 LYRM1O43325 122 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 GGCTO75223 188 aaKnown RBP6.5□□□□□ -1.37
UBR1-204ENST00000563239 PITX3O75364 302 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 SAP30O75446 220 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 IFNA17P01571 189 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 SULT1A3P0DMM9 295 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms