RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 LYZL2Q7Z4W2 148 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 PRR25Q96S07 402 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 GNB4Q9HAV0 340 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 A0A0G2JLM5 398 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 A0A1B0GU03 582 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 A0A1B0GW64 132 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 IGLC7A0M8Q6 106 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 HMX3A6NHT5 357 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 CYB5BO43169 146 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 IL5P05113 134 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 CTRB1P17538 263 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 PSMB6P28072 239 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 PRCDQ00LT1 54 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 CTRB2Q6GPI1 263 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 MITD1Q8WV92 249 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 GPR146Q96CH1 333 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 OR5B12Q96R08 314 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 KLK9Q9UKQ9 250 aa12.11□□□□□ -0.47
USB1-208ENST00000563207 A0A0G2JRQ6 117 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 INS-IGF2F8WCM5 200 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 ST8SIA3O43173 380 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 IFNA17P01571 189 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 TRGV3P03979 118 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 APELAP0DMC3 54 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 MYOD1P15172 320 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 HIST1H1BP16401 226 aaKnown RBP12.1□□□□□ -0.47
USB1-208ENST00000563207 SPCS3P61009 180 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 CD69Q07108 199 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 SMCO1Q147U7 214 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 Q6ZRM9 215 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 OR1L6Q8NGR2 347 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 DPF1Q92782 380 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 USMG5Q96IX5 58 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 MARVELD1Q9BSK0 173 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 MCRIP2Q9BUT9 160 aaKnown RBP12.1□□□□□ -0.47
USB1-208ENST00000563207 HINT2Q9BX68 163 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 PRR13Q9NZ81 148 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 CACNG5Q9UF02 275 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 RYR3Q15413 4870 aa12.1□□□□□ -0.47
USB1-208ENST00000563207 TRBV9A0A0B4J1U6 114 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 PRAF2O60831 178 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 PTTG1O95997 202 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 IFNA21P01568 189 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 DEFA4P12838 97 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 AREGP15514 252 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 TPPP2P59282 170 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 ERHP84090 104 aaKnown RBP12.09□□□□□ -0.47
USB1-208ENST00000563207 RUNX1Q01196 453 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 DCTN2Q13561 401 aaKnown RBP12.09□□□□□ -0.47
USB1-208ENST00000563207 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 OR11H1Q8NG94 326 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 OR10W1Q8NGF6 305 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 ZNF431Q8TF32 576 aaPredicted RBP12.09□□□□□ -0.47
USB1-208ENST00000563207 C4orf3Q8WVX3 66 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 B9D2Q9BPU9 175 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 PLEKHA3Q9HB20 300 aa12.09□□□□□ -0.47
USB1-208ENST00000563207 GPN1Q9HCN4 374 aaPredicted RBP12.09□□□□□ -0.47
USB1-208ENST00000563207 INMT-MINDY4F8WBC2 141 aa12.08□□□□□ -0.48
USB1-208ENST00000563207 OR13C7P0DN81 318 aa12.08□□□□□ -0.48
USB1-208ENST00000563207 WT1-ASQ06250 92 aa12.08□□□□□ -0.48
USB1-208ENST00000563207 FHL3Q13643 280 aa12.08□□□□□ -0.48
USB1-208ENST00000563207 FAM209BQ5JX69 171 aa12.08□□□□□ -0.48
USB1-208ENST00000563207 NECAP1Q8NC96 275 aa12.08□□□□□ -0.48
USB1-208ENST00000563207 MS4A10Q96PG2 267 aa12.08□□□□□ -0.48
USB1-208ENST00000563207 THYN1Q9P016 225 aa12.08□□□□□ -0.48
USB1-208ENST00000563207 LSM4Q9Y4Z0 139 aaKnown RBP12.08□□□□□ -0.48
USB1-208ENST00000563207 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 FAM90A26D6RGX4 464 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 HOXB5P09067 269 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 GGNBP1Q5YKI7 109 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 OR2C3Q8N628 320 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 ZNF114Q8NC26 417 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 ENY2Q9NPA8 101 aa12.07□□□□□ -0.48
USB1-208ENST00000563207 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 I3L521 148 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 PITX3O75364 302 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 SUB1P53999 127 aaKnown RBP eCLIP12.06□□□□□ -0.48
USB1-208ENST00000563207 RHOGP84095 191 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 C12orf45Q8N5I9 185 aaPredicted RBP12.06□□□□□ -0.48
USB1-208ENST00000563207 OR52B4Q8NGK2 314 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 OR1P1Q8NH06 330 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 OR1S1Q8NH92 325 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 FANCD2OSQ96PS1 177 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 ASCL2Q99929 193 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 HSPB7Q9UBY9 170 aa12.06□□□□□ -0.48
USB1-208ENST00000563207 F11RQ9Y624 299 aaKnown RBP12.06□□□□□ -0.48
USB1-208ENST00000563207 IGLV11-55A0A075B6I3 123 aa12.05□□□□□ -0.48
USB1-208ENST00000563207 REG1AP05451 166 aa12.05□□□□□ -0.48
USB1-208ENST00000563207 SNCAP37840 140 aa12.05□□□□□ -0.48
USB1-208ENST00000563207 ATP5G2Q06055 141 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms