RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ZFP57Q9NU63 452 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 ALG5Q9Y673 324 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 MPTX1A8MV57 137 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 INS-IGF2F8WCM5 200 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 GOSR2O14653 212 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 SNCAP37840 140 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 LCNL1Q6ZST4 164 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 NDUFA11Q86Y39 141 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 OR2C3Q8N628 320 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 OR1L6Q8NGR2 347 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 KLK15Q9H2R5 256 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 HIPK2Q9H2X6 1198 aa14.68□□□□□ -0.06
RAB40C-207ENST00000563109 HEYLQ9NQ87 328 aaPredicted RBP14.68□□□□□ -0.06
RAB40C-207ENST00000563109 NUDT19A8MXV4 375 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 WRBO00258 174 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 PRH1P02810 166 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 RPL23AP62750 156 aaKnown RBP14.67□□□□□ -0.06
RAB40C-207ENST00000563109 C19orf35Q6ZS72 473 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 ZBTB8BQ8NAP8 495 aaPredicted RBP14.67□□□□□ -0.06
RAB40C-207ENST00000563109 SPATA3Q8NHX4 192 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 DTD1Q8TEA8 209 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 OR10C1Q96KK4 312 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 RBKSQ9H477 322 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 GSKIPQ9P0R6 139 aa14.67□□□□□ -0.06
RAB40C-207ENST00000563109 F11RQ9Y624 299 aaKnown RBP14.67□□□□□ -0.06
RAB40C-207ENST00000563109 A0A0G2JLM5 398 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 A0A1W2PRX2 142 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 FAM223BA6NKX1 122 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 SCGB1D2O95969 90 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 NKX2-1P43699 371 aaPredicted RBP14.66□□□□□ -0.06
RAB40C-207ENST00000563109 SUB1P53999 127 aaKnown RBP eCLIP14.66□□□□□ -0.06
RAB40C-207ENST00000563109 RHOGP84095 191 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 NSUN5P1Q3KNT7 163 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 FAM223AQ8IWN6 122 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 ZNF114Q8NC26 417 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 NECAP1Q8NC96 275 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 OR4D5Q8NGN0 318 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 MYOZ3Q8TDC0 251 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 UBE2E2Q96LR5 201 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 C2orf50Q96LR7 162 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 THYN1Q9P016 225 aa14.66□□□□□ -0.06
RAB40C-207ENST00000563109 COL6A5A8TX70 2615 aa14.65□□□□□ -0.06
RAB40C-207ENST00000563109 OR2J3O76001 311 aa14.65□□□□□ -0.06
RAB40C-207ENST00000563109 HIST2H2BDQ6DRA6 164 aa14.65□□□□□ -0.06
RAB40C-207ENST00000563109 SLC25A24Q6NUK1 477 aa14.65□□□□□ -0.06
RAB40C-207ENST00000563109 ZNF491Q8N8L2 437 aa14.65□□□□□ -0.06
RAB40C-207ENST00000563109 KLHL30-AS1Q8NEE0 82 aa14.65□□□□□ -0.06
RAB40C-207ENST00000563109 OR1P1Q8NH06 330 aa14.65□□□□□ -0.06
RAB40C-207ENST00000563109 USMG5Q96IX5 58 aa14.65□□□□□ -0.06
RAB40C-207ENST00000563109 CIB3Q96Q77 187 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-207ENST00000563109 IGLV11-55A0A075B6I3 123 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 TRBV9A0A0B4J1U6 114 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 SYNGR2O43760 224 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 LY86O95711 162 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 HTR2BP41595 481 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 CDX1P47902 265 aaPredicted RBP14.64□□□□□ -0.07
RAB40C-207ENST00000563109 DEFA5Q01523 94 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 C2orf68Q2NKX9 166 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 SLC24A4Q8NFF2 622 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 P2RX4Q99571 388 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 MAGT1Q9H0U3 335 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 MED28Q9H204 178 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 MGAT4CQ9UBM8 478 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 FBXL7Q9UJT9 491 aa14.64□□□□□ -0.07
RAB40C-207ENST00000563109 M0QZ24 198 aa14.63□□□□□ -0.07
RAB40C-207ENST00000563109 IAPPP10997 89 aa14.63□□□□□ -0.07
RAB40C-207ENST00000563109 ATP5G2Q06055 141 aa14.63□□□□□ -0.07
RAB40C-207ENST00000563109 NOXA1Q86UR1 476 aa14.63□□□□□ -0.07
RAB40C-207ENST00000563109 C4orf3Q8WVX3 66 aa14.63□□□□□ -0.07
RAB40C-207ENST00000563109 FANCD2OSQ96PS1 177 aa14.63□□□□□ -0.07
RAB40C-207ENST00000563109 CORTO00230 105 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 IFNA10P01566 189 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 IGHV3-11P01762 117 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 RNASE2P10153 161 aaKnown RBP14.62□□□□□ -0.07
RAB40C-207ENST00000563109 NPY1RP25929 384 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 ID3Q02535 119 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 KLK9Q2XQG4 91 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 C15orf32Q32M92 178 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 MISP3Q96FF7 219 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 GNB4Q9HAV0 340 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 KLK9Q9UKQ9 250 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 U3KQ87 197 aa14.62□□□□□ -0.07
RAB40C-207ENST00000563109 SSSCA1O60232 199 aa14.61□□□□□ -0.07
RAB40C-207ENST00000563109 SIX6O95475 246 aa14.61□□□□□ -0.07
RAB40C-207ENST00000563109 LGALS1P09382 135 aaKnown RBP14.61□□□□□ -0.07
RAB40C-207ENST00000563109 POLR2GP62487 172 aaKnown RBP eCLIP14.61□□□□□ -0.07
RAB40C-207ENST00000563109 RPP30P78346 268 aaKnown RBP14.61□□□□□ -0.07
RAB40C-207ENST00000563109 CYCSP99999 105 aaKnown RBP14.61□□□□□ -0.07
RAB40C-207ENST00000563109 EXOSC2Q13868 293 aaKnown RBP14.61□□□□□ -0.07
RAB40C-207ENST00000563109 KIAA0141Q14154 515 aaPredicted RBP14.61□□□□□ -0.07
RAB40C-207ENST00000563109 OR4F17Q8NGA8 305 aa14.61□□□□□ -0.07
RAB40C-207ENST00000563109 EEF1AKMT3Q96AZ1 226 aa14.61□□□□□ -0.07
RAB40C-207ENST00000563109 CXorf58Q96LI9 332 aa14.61□□□□□ -0.07
RAB40C-207ENST00000563109 OR5B12Q96R08 314 aa14.61□□□□□ -0.07
RAB40C-207ENST00000563109 OR4F4Q96R69 305 aa14.61□□□□□ -0.07
RAB40C-207ENST00000563109 ADARB2-AS1A8MUL3 147 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 NDUFB8O95169 186 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 MBPP02686 304 aaPredicted RBP14.6□□□□□ -0.07
RAB40C-207ENST00000563109 MFAP2P55001 183 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 ATP5IP56385 69 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms