RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 S100A6P06703 90 aa17.27■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ARL14EPLP0DKL9 152 aa17.27■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 RND2P52198 227 aa17.27■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 CD69Q07108 199 aa17.27■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ADIRFQ15847 76 aa17.27■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 SPNS3Q6ZMD2 512 aa17.27■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 TEX45Q8NA69 505 aa17.27■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 OR10W1Q8NGF6 305 aa17.27■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 VENTXO95231 258 aa17.26■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 CST9LP1Q5W188 147 aa17.26■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 RNASEH2CQ8TDP1 164 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ABHD5Q8WTS1 349 aa17.26■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 Q8WTZ3 238 aa17.26■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ZNF430Q9H8G1 570 aaPredicted RBP17.26■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ENSAO43768 121 aaKnown RBP17.25■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 GAMTQ14353 236 aa17.25■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 C19orf24Q9BVV8 132 aa17.25■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 LIPFP07098 398 aa17.25■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 LINC00869P0C866 280 aa17.25■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 RPS10P46783 165 aaKnown RBP17.25■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 C11orf71Q6IPW1 123 aa17.25■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ROS1P08922 2347 aa17.25■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 BUB1B-PAK6H3BSN5 160 aa17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 SLC25A17O43808 307 aa17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 CLN5O75503 358 aa17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 RPL23P62829 140 aaKnown RBP17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ZNF343Q6P1L6 599 aa17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 SLC16A13Q7RTY0 426 aa17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 PNKDQ8N490 385 aa17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 LY6G5BQ8NDX9 201 aa17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 INSIG2Q9Y5U4 225 aa17.24■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 TGOLN2O43493 480 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 GCHFRP30047 84 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 UBE2G2P60604 165 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 LY6DQ14210 128 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 UNQ6494/PRO21346Q6UXR6 183 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 MMD2Q8IY49 270 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 URGCP-MRPS24S4R325 110 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 PKDREJQ9NTG1 2253 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 OR10J1P30954 320 aa17.23■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 IGHV1-3A0A0C4DH29 117 aa17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 CXCL1P09341 107 aa17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ATP5G3P48201 142 aa17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 AKR1D1P51857 326 aa17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 MOB3BQ86TA1 216 aa17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 FAM122AQ96E09 287 aa17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 SEPSECSQ9HD40 501 aaKnown RBP17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 DOK5Q9P104 306 aa17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 FUT9Q9Y231 359 aa17.22■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 C5orf52A6NGY3 159 aa17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 CGB1A6NKQ9 187 aa17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 SNRPEP62304 92 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 WT1-ASQ06250 92 aa17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 DTX2Q86UW9 622 aa17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 RPEQ96AT9 228 aa17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ONECUT1Q9UBC0 465 aa17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 ARL2-SNX15V9GYD0 113 aa17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 IGF2RP11717 2491 aa17.21■□□□□ 0.35
VPS9D1-AS1-202ENST00000562866 TGIF2-C20orf24A0A0A6YYL0 155 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 IGHV3-72A0A0B4J1Y9 119 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 E7EUB6 86 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 ACTL6BO94805 426 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 COX7A1P24310 79 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 GNB1P62873 340 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 PRSS8Q16651 343 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 FAM78BQ5VT40 261 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 OR4P4Q8NGL7 312 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 ANAPC16Q96DE5 110 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 RNF2Q99496 336 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 RNF5Q99942 180 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 CHODLQ9H9P2 273 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 TECRQ9NZ01 308 aaKnown RBP17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 SOD3P08294 240 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 C10orf55Q5SWW7 151 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 SPATA31B1PQ5VZV4 182 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 C16orf82Q7Z2V1 217 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 LINC00518Q8N0U6 118 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 FAM210BQ96KR6 192 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 TMEM167BQ9NRX6 74 aa17.2■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 TRBV24-1A0A075B6N3 115 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 IGKV1OR2-108A0A075B7D4 117 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 H7BYZ3 331 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 CRYGBP07316 175 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 NPPCP23582 126 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 S100PP25815 95 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 RPL35P42766 123 aaKnown RBP17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 TAS2R45P59539 299 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 RITA1Q96K30 269 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 OR5B12Q96R08 314 aa17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 METTL1Q9UBP6 276 aaKnown RBP17.19■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 NBEAQ8NFP9 2946 aa17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 A0A1W2PPI3 338 aa17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 UBE2CO00762 179 aa17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 RPL27AP46776 148 aaKnown RBP17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 PSG5Q15238 335 aa17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 ETFRF1Q6IPR1 90 aa17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 ACY3Q96HD9 319 aa17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 UHRF2Q96PU4 802 aa17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 TPSG1Q9NRR2 321 aa17.18■□□□□ 0.34
VPS9D1-AS1-202ENST00000562866 LY6LH3BQJ8 138 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms