RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CMTM1Q8IZ96 169 aa9.6□□□□□ -0.87
SF3B3-202ENST00000562722 TMEM56Q96MV1 263 aa9.6□□□□□ -0.87
SF3B3-202ENST00000562722 ZNF2Q9BSG1 426 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-202ENST00000562722 C15orf62A8K5M9 175 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 K7EMT4 169 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 NUPL2O15504 423 aaKnown RBP9.59□□□□□ -0.87
SF3B3-202ENST00000562722 PGLYRP1O75594 196 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-202ENST00000562722 DEDDO75618 318 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 PMP2P02689 132 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 F2RP25116 425 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 ADMP35318 185 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 RELQ04864 619 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-202ENST00000562722 TMEM116Q8NCL8 245 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 FCAMRQ8WWV6 532 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 DGCR14Q96DF8 476 aaKnown RBP9.59□□□□□ -0.87
SF3B3-202ENST00000562722 MISP3Q96FF7 219 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 CMTM3Q96MX0 182 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 ATP6V0BQ99437 205 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 RNF2Q99496 336 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 Q9H521 79 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 FBXL17Q9UF56 701 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 SMPXQ9UHP9 88 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 PRNDQ9UKY0 176 aa9.59□□□□□ -0.87
SF3B3-202ENST00000562722 KMT2AQ03164 3969 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 IGHV7-4-1A0A0J9YVY3 117 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 MPTX1A8MV57 137 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 K7EIM0 57 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 RFX2P48378 723 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 CMC4P56277 68 aaPredicted RBP9.58□□□□□ -0.88
SF3B3-202ENST00000562722 ZNF124Q15973 351 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 OR5H2Q8NGV7 314 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 SLC25A46Q96AG3 418 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 MOB3AQ96BX8 217 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 S100A16Q96FQ6 103 aaKnown RBP9.58□□□□□ -0.88
SF3B3-202ENST00000562722 RARRES2Q99969 163 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 CSTL1Q9H114 145 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 FKBP11Q9NYL4 201 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 FRAS1Q86XX4 4008 aa9.58□□□□□ -0.88
SF3B3-202ENST00000562722 IGHV3OR16-13A0A075B7E8 117 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 IGHV3-74A0A0B4J1X5 117 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 F8W735 103 aaPredicted RBP9.57□□□□□ -0.88
SF3B3-202ENST00000562722 GPR31O00270 319 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 CHEK1O14757 476 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 IFNA4P05014 189 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 CTSGP08311 255 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 TAS2R46P59540 309 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
SF3B3-202ENST00000562722 RBMS2Q15434 407 aaKnown RBP9.57□□□□□ -0.88
SF3B3-202ENST00000562722 GBGT1Q8N5D6 347 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 C11orf45Q8TAV5 145 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 GATAD1Q8WUU5 269 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 TSC22D3Q99576 134 aa9.57□□□□□ -0.88
SF3B3-202ENST00000562722 C15orf61A6NNL5 157 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 XRCC3O43542 346 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 EIF4EP06730 217 aaKnown RBP9.56□□□□□ -0.88
SF3B3-202ENST00000562722 S100GP29377 79 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 MFAP4P55083 255 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 PAFAH1B2P68402 229 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 NEDD8Q15843 81 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 PHLDA2Q53GA4 152 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 TMEM69Q5SWH9 247 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 LGALS9CQ6DKI2 356 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 DHRS11Q6UWP2 260 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 OR6F1Q8NGZ6 308 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 OR1P1Q8NH06 330 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 OR11H2Q8NH07 326 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 OR4A16Q8NH70 328 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
SF3B3-202ENST00000562722 MFFQ9GZY8 342 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 FXYD6Q9H0Q3 95 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 HERC2O95714 4834 aa9.56□□□□□ -0.88
SF3B3-202ENST00000562722 TRAV14DV4A0A0A6YYC5 116 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 DBX1A6NMT0 343 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 GNG7O60262 68 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 MT-CO2P00403 227 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 CA1P00915 261 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-202ENST00000562722 IGHV3-48P01763 117 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 TAS2R20P59543 309 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 RPL11P62913 178 aaKnown RBP9.55□□□□□ -0.88
SF3B3-202ENST00000562722 UBE2NLQ5JXB2 153 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 H2BFWTQ7Z2G1 175 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 SAMD12Q8N8I0 201 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 GINS3Q9BRX5 216 aa9.55□□□□□ -0.88
SF3B3-202ENST00000562722 YTHDF1Q9BYJ9 559 aaKnown RBP9.55□□□□□ -0.88
SF3B3-202ENST00000562722 DNASE2O00115 360 aaPredicted RBP9.54□□□□□ -0.88
SF3B3-202ENST00000562722 DEFB4AO15263 64 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 TMEM127O75204 238 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 HLA-DMAP28067 261 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 HRH1P35367 487 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 TSPAN5P62079 268 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 TCF24Q7RTU0 167 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 CROCCP3Q8IVE0 287 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 OR10C1Q96KK4 312 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 TXN2Q99757 166 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 NXF2Q9GZY0 626 aaKnown RBP9.54□□□□□ -0.88
SF3B3-202ENST00000562722 TMEM14BQ9NUH8 114 aa9.54□□□□□ -0.88
SF3B3-202ENST00000562722 DNAH10Q8IVF4 4471 aa9.53□□□□□ -0.88
SF3B3-202ENST00000562722 I3L2K1 104 aa9.53□□□□□ -0.88
SF3B3-202ENST00000562722 ST8SIA3O43173 380 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms