RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 OR13C7P0DN81 318 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 WT1-ASQ06250 92 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 CLLU1Q5K131 121 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 ZNF562Q6V9R5 426 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 Q8N9W7 124 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 HSD17B11Q8NBQ5 300 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 OR10W1Q8NGF6 305 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 RNASEH2CQ8TDP1 164 aaKnown RBP11.37□□□□□ -0.59
COMMD4-205ENST00000562310 TMEM170AQ8WVE7 144 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 TMED6Q8WW62 240 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 RBM14Q96PK6 669 aaKnown RBP11.37□□□□□ -0.59
COMMD4-205ENST00000562310 SSX3Q99909 188 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 RASL11BQ9BPW5 248 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 PITPNC1Q9UKF7 332 aa11.37□□□□□ -0.59
COMMD4-205ENST00000562310 UBE2L5PA0A1B0GUS4 154 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 A0A1B0GW64 132 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 TEX22C9J3V5 150 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 E7EUB6 86 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 M0QZK8 103 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 CORTO00230 105 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 SPP1P10451 314 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 SSBP2P81877 361 aaPredicted RBP11.36□□□□□ -0.59
COMMD4-205ENST00000562310 FXYD3Q14802 87 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 FBLN7Q53RD9 439 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 C16orf82Q7Z2V1 217 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 ARPC1AQ92747 370 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 SLC25A33Q9BSK2 321 aa11.36□□□□□ -0.59
COMMD4-205ENST00000562310 RPS10-NUDT3A0A1W2PQS6 291 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 FCN1O00602 326 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 SMAD7O15105 426 aaKnown RBP11.35□□□□□ -0.59
COMMD4-205ENST00000562310 MPDU1O75352 247 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 ATP6V0CP27449 155 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 RAB5CP51148 216 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 OR1L6Q8NGR2 347 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 OR1P1Q8NH06 330 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 ABHD5Q8WTS1 349 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 RNF141Q8WVD5 230 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 P2RX4Q99571 388 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 PSMG3Q9BT73 122 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-205ENST00000562310 WDR61Q9GZS3 305 aaKnown RBP11.35□□□□□ -0.59
COMMD4-205ENST00000562310 TIMM9Q9Y5J7 89 aa11.35□□□□□ -0.59
COMMD4-205ENST00000562310 PDZD2O15018 2839 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 A6NDX4 124 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 UMAD1C9J7I0 102 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 H3BUX3 64 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 CD5LO43866 347 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 SOX15O60248 233 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 FBXO24O75426 580 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 GPX4P36969 197 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-205ENST00000562310 SULT1A2P50226 295 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 CX3CL1P78423 397 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 FAM74A1Q5RGS3 127 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 CIARTQ8N365 385 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-205ENST00000562310 C5orf56Q8N8D9 126 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 OR5R1Q8NH85 324 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 PIFOQ8TCI5 191 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 SSMEM1Q8WWF3 244 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 CACNG8Q8WXS5 425 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 TAF15Q92804 592 aaKnown RBP eCLIP11.34□□□□□ -0.59
COMMD4-205ENST00000562310 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 WDR83OSQ9Y284 106 aa11.34□□□□□ -0.59
COMMD4-205ENST00000562310 F11RQ9Y624 299 aaKnown RBP11.34□□□□□ -0.59
COMMD4-205ENST00000562310 BTBD17A6NE02 478 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 C17orf112F2Z3M2 114 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 TRIM77I1YAP6 450 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 CYB5BO43169 146 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 NMBP08949 121 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 AREGP15514 252 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 FGF7P21781 194 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 OR2G3Q8NGZ4 309 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 SAT2Q96F10 170 aaPredicted RBP11.33□□□□□ -0.6
COMMD4-205ENST00000562310 SLC35E1Q96K37 410 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 SH3BGRL3Q9H299 93 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 PLXNB1O43157 2135 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 C2CD3Q4AC94 2353 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 NAV3Q8IVL0 2385 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 ABCA1O95477 2261 aa11.33□□□□□ -0.6
COMMD4-205ENST00000562310 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 SMCO3A2RU48 225 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 NPIPB5A8MRT5 1133 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 MDKP21741 143 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-205ENST00000562310 SERF2P84101 59 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 AKR1C1Q04828 323 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 CD69Q07108 199 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 DEFB112Q30KQ8 113 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 BTNL8Q6UX41 500 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 DPPA3Q6W0C5 159 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 SLC16A13Q7RTY0 426 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 CENPVQ7Z7K6 275 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-205ENST00000562310 ZNF709Q8N972 641 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 TMEM68Q96MH6 324 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
COMMD4-205ENST00000562310 REG1AP05451 166 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 CRYGCP07315 174 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 CTRB1P17538 263 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 HNF1AP20823 631 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms