RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 BSXQ3C1V8 233 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 SPINK9Q5DT21 86 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 SPANXN5Q5MJ07 72 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 CENPVQ7Z7K6 275 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-210ENST00000561817 STX12Q86Y82 276 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 TGIF2LXQ8IUE1 241 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 PNKDQ8N490 385 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 TMEM217Q8N7C4 229 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 OR4A16Q8NH70 328 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 TMEM167AQ8TBQ9 72 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 C10orf105Q8TEF2 133 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 LHX4Q969G2 390 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 CIB3Q96Q77 187 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-210ENST00000561817 SCRT1Q9BWW7 348 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 BPESC1Q9GZL8 116 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 MS4A7Q9GZW8 240 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-210ENST00000561817 HIPK2Q9H2X6 1198 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 VCX2Q9H322 139 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 NARFLQ9H6Q4 476 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 PARP11Q9NR21 331 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 ONECUT1Q9UBC0 465 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 CACFD1Q9UGQ2 172 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 ZNF257Q9Y2Q1 563 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 WASHC3Q9Y3C0 194 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 KPTNQ9Y664 436 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 VPS13CQ709C8 3753 aa5.25□□□□□ -1.57
CAPN3-210ENST00000561817 IGHV1-3A0A0C4DH29 117 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 IGHV2-70DA0A0C4DH43 119 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 TEX50A0A1B0GTY4 177 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 CEBPZOSA8MTT3 80 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 E7EUB6 86 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 INS-IGF2F8WCM5 200 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 RNASEK-C17orf49H0YIS7 233 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 TEX46H3BTG2 121 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 RRHO14718 337 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 ENSAO43768 121 aaKnown RBP5.24□□□□□ -1.57
CAPN3-210ENST00000561817 DFFBO76075 338 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 COX7A1P24310 79 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 IL3RAP26951 378 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 PDLIM4P50479 330 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 PRCDQ00LT1 54 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 SLC38A11Q08AI6 406 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 KLRD1Q13241 179 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 SMUG1Q53HV7 270 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 TPTE2P1Q5T6R2 138 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 PXDC1Q5TGL8 231 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 EIF5AL1Q6IS14 154 aaKnown RBP5.24□□□□□ -1.57
CAPN3-210ENST00000561817 HSD17B11Q8NBQ5 300 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 OR4C13Q8NGP0 309 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 OR4A5Q8NH83 315 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 RNASE8Q8TDE3 154 aaKnown RBP5.24□□□□□ -1.57
CAPN3-210ENST00000561817 FLYWCH2Q96CP2 140 aaKnown RBP5.24□□□□□ -1.57
CAPN3-210ENST00000561817 HARBI1Q96MB7 349 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 TBX15Q96SF7 602 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 SIRT7Q9NRC8 400 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 MMP26Q9NRE1 261 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 NDUFA4L2Q9NRX3 87 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 PRNDQ9UKY0 176 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 OR51B2Q9Y5P1 312 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 X6R8D5 127 aa5.24□□□□□ -1.57
CAPN3-210ENST00000561817 CENPEQ02224 2701 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 A0A096LNT2 108 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 IGHV3-72A0A0B4J1Y9 119 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 IGHV4-61A0A0C4DH41 118 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 RAB19A4D1S5 217 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 ZNF705EA8MWA4 302 aaPredicted RBP5.23□□□□□ -1.57
CAPN3-210ENST00000561817 FAM157AC9JC47 383 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 TRIM77I1YAP6 450 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 IFNA17P01571 189 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 USF1P22415 310 aaPredicted RBP5.23□□□□□ -1.57
CAPN3-210ENST00000561817 LGALS7P47929 136 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 FHITP49789 147 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 RAB5CP51148 216 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 RAB13P51153 203 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 HBG1P69891 147 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 HBG2P69892 147 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 LCN2P80188 198 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 SSBP2P81877 361 aaPredicted RBP5.23□□□□□ -1.57
CAPN3-210ENST00000561817 RUNX1Q01196 453 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 ATP6V1FQ16864 119 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 PVRIGQ6DKI7 326 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 SPSB3Q6PJ21 355 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 VMO1Q7Z5L0 202 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 LHFPL4Q7Z7J7 247 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 DYNAPQ8N1N2 210 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 TEX45Q8NA69 505 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 OR2G3Q8NGZ4 309 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 DPF1Q92782 380 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 MARC2Q969Z3 335 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 GNPNAT1Q96EK6 184 aaPredicted RBP5.23□□□□□ -1.57
CAPN3-210ENST00000561817 AIFM2Q9BRQ8 373 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 PSMG3Q9BT73 122 aaPredicted RBP5.23□□□□□ -1.57
CAPN3-210ENST00000561817 TMEM147Q9BVK8 224 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 WDR61Q9GZS3 305 aaKnown RBP5.23□□□□□ -1.57
CAPN3-210ENST00000561817 DPM3Q9P2X0 92 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 CBY1Q9Y3M2 126 aa5.23□□□□□ -1.57
CAPN3-210ENST00000561817 AMMECR1Q9Y4X0 333 aaPredicted RBP5.23□□□□□ -1.57
CAPN3-210ENST00000561817 SETXQ7Z333 2677 aaKnown RBP5.23□□□□□ -1.57
CAPN3-210ENST00000561817 PLXNB1O43157 2135 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms