RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 A0A087WX48 190 aa0.46□□□□□ -2.34
HMBOX1-216ENST00000561377 IGKV1-9A0A0C4DH69 117 aa0.46□□□□□ -2.34
HMBOX1-216ENST00000561377 OR5G3P0C626 314 aa0.46□□□□□ -2.34
HMBOX1-216ENST00000561377 RSU1Q15404 277 aa0.46□□□□□ -2.34
HMBOX1-216ENST00000561377 SFXN4Q6P4A7 337 aa0.46□□□□□ -2.34
HMBOX1-216ENST00000561377 FAM151BQ6UXP7 276 aa0.46□□□□□ -2.34
HMBOX1-216ENST00000561377 OR4D11Q8NGI4 311 aa0.46□□□□□ -2.34
HMBOX1-216ENST00000561377 CFAP53Q96M91 514 aa0.46□□□□□ -2.34
HMBOX1-216ENST00000561377 C21orf140B9A014 251 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 RPS4Y1P22090 263 aaKnown RBP0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 MAGEA2P43356 314 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 MAP2K4P45985 399 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 UBE2IP63279 158 aaKnown RBP0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 IFITM2Q01629 132 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 CDK10Q15131 360 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 OGFRL1Q5TC84 451 aaPredicted RBP0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 LRRC25Q8N386 305 aaPredicted RBP0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 PFN4Q8NHR9 129 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 MIXL1Q9H2W2 232 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 USE1Q9NZ43 259 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
HMBOX1-216ENST00000561377 TOPBP1Q92547 1522 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 TMEM212A6NML5 194 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 LRRN3E7EW58 273 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 M0QZ92 97 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 M0R2N4 97 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 ACOX3O15254 700 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 OR5F1O95221 314 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 HTR1AP08908 422 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 UBBP0CG47 229 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 PDE6HQ13956 83 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 GUK1Q16774 197 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 CD200R1LQ6Q8B3 271 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 LCN15Q6UWW0 184 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 OR13C4Q8NGS5 318 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 RAB8BQ92930 207 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 TMEM106AQ96A25 262 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 DERL1Q9BUN8 251 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 UPF3BQ9BZI7 483 aaKnown RBP0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 CISHQ9NSE2 258 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 CKLFQ9UBR5 152 aa0.44□□□□□ -2.34
HMBOX1-216ENST00000561377 DENND4CQ5VZ89 1909 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 TRBV20OR9-2A0A075B6H5 130 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 TRAV14DV4A0A0A6YYC5 116 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 A0A0J9YY10 115 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 LINC00854A0A1B0GVQ3 168 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 A0A1B0GX78 115 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 INMT-MINDY4F8WBC2 141 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 H0Y980 276 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 ISG15P05161 165 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 CTSDP07339 412 aaPredicted RBP0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 COX6A1P12074 109 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 MIFP14174 115 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 COQ5Q5HYK3 327 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 RPL22L1Q6P5R6 122 aaKnown RBP0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 Q6ZS49 121 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 AAED1Q7RTV5 226 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 KRTAP19-3Q7Z4W3 81 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 MRPL30Q8TCC3 161 aaKnown RBP0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 FGFR1OP2Q9NVK5 253 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 RIC1Q4ADV7 1423 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 MCM3APO60318 1980 aa0.43□□□□□ -2.34
HMBOX1-216ENST00000561377 TTC21AQ8NDW8 1320 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 SBF1O95248 1867 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 EVPLLA8MZ36 301 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 DCTN3O75935 186 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 DEXIO95424 95 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 IGKV1-5P01602 117 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 KISS1Q15726 138 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 GRK1Q15835 563 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 SPANXN3Q5MJ09 141 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 ALKAL1Q6UXT8 129 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 Q6ZQT0 140 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 SCGB3A1Q96QR1 104 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 WDR61Q9GZS3 305 aaKnown RBP0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 FAM96AQ9H5X1 160 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 CEP192Q8TEP8 1941 aa0.42□□□□□ -2.34
HMBOX1-216ENST00000561377 ZFC3H1O60293 1989 aaKnown RBP0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST1H2BOP23527 126 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST1H2BBP33778 126 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 BLVRAP53004 296 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST1H2BDP58876 126 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 MAGOHP61326 146 aaKnown RBP0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST1H2BCP62807 126 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 PMAIP1Q13794 54 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST3H3Q16695 136 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST2H2BEQ16778 126 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 SPANXN5Q5MJ07 72 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 AADACL3Q5VUY0 350 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 PHF13Q86YI8 300 aaPredicted RBP0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 C10orf67Q8IYJ2 551 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 MCFD2Q8NI22 146 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 ZNF418Q8TF45 676 aaPredicted RBP0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST1H2BHQ93079 126 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST1H2BNQ99877 126 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 HIST1H2BMQ99879 126 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 OR51I1Q9H343 314 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 XPNPEP1Q9NQW7 623 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms