RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 LOXL3P58215 753 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 BLCAPP62952 87 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 SRSF3P84103 164 aaKnown RBP5.46□□□□□ -1.54
SPG11-224ENST00000561268 TMEM30BQ3MIR4 351 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 TCTEX1D4Q5JR98 221 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 SOHLH1Q5JUK2 328 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 CCDC144NLQ6NUI1 221 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 TMEM88Q6PEY1 159 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 ZNF497Q6ZNH5 498 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 LYZL2Q7Z4W2 148 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 CENPVQ7Z7K6 275 aaPredicted RBP5.46□□□□□ -1.54
SPG11-224ENST00000561268 STX12Q86Y82 276 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 THNSL2Q86YJ6 484 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 ZNF695Q8IW36 515 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 SELENOHQ8IZQ5 122 aaKnown RBP5.46□□□□□ -1.54
SPG11-224ENST00000561268 Q8N6K4 173 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 TMEM252Q8N6L7 170 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 SLC35G3Q8N808 338 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 ZNF565Q8N9K5 539 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 ZNF439Q8NDP4 499 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 OR2G3Q8NGZ4 309 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 OR8U1Q8NH10 309 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 TCTEX1D2Q8WW35 142 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 ST6GALNAC6Q969X2 333 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 BTF3L4Q96K17 158 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 ATP5SQ99766 215 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 SLC25A33Q9BSK2 321 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 TMPRSS5Q9H3S3 457 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 SAV1Q9H4B6 383 aaPredicted RBP5.46□□□□□ -1.54
SPG11-224ENST00000561268 IDI2-AS1Q9NZ38 188 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 ZNF580Q9UK33 172 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 MOB4Q9Y3A3 225 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 OR2W1Q9Y3N9 320 aa5.46□□□□□ -1.54
SPG11-224ENST00000561268 AMMECR1Q9Y4X0 333 aaPredicted RBP5.46□□□□□ -1.54
SPG11-224ENST00000561268 LSM5Q9Y4Y9 91 aaKnown RBP5.46□□□□□ -1.54
SPG11-224ENST00000561268 RBFOX3A6NFN3 312 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 G3V4G9 280 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 AP4M1O00189 453 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 PRH1P02810 166 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 CD28P10747 220 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 BTF3P20290 206 aaKnown RBP5.45□□□□□ -1.54
SPG11-224ENST00000561268 AADACP22760 399 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 BRS3P32247 399 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 VDAC2P45880 294 aaPredicted RBP5.45□□□□□ -1.54
SPG11-224ENST00000561268 SULT1A1P50225 295 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 RAB7AP51149 207 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 RPL23AP62750 156 aaKnown RBP5.45□□□□□ -1.54
SPG11-224ENST00000561268 VAMP2P63027 116 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 ZNF616Q08AN1 781 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 ATP6V1FQ16864 119 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 C5orf56Q8N8D9 126 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 SUMF2Q8NBJ7 301 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 WFDC9Q8NEX5 89 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 MBD3L1Q8WWY6 194 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 TOMM40LQ969M1 308 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 CITED2Q99967 270 aaPredicted RBP5.45□□□□□ -1.54
SPG11-224ENST00000561268 CTDSP1Q9GZU7 261 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 EIF5A2Q9GZV4 153 aaKnown RBP5.45□□□□□ -1.54
SPG11-224ENST00000561268 MBNL3Q9NUK0 354 aaKnown RBP5.45□□□□□ -1.54
SPG11-224ENST00000561268 LIN7CQ9NUP9 197 aaKnown RBP5.45□□□□□ -1.54
SPG11-224ENST00000561268 PSG11Q9UQ72 335 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 TNCP24821 2201 aa5.45□□□□□ -1.54
SPG11-224ENST00000561268 ELOA3CA0A087WX78 387 aaPredicted RBP5.44□□□□□ -1.54
SPG11-224ENST00000561268 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 TMEM30CPA0ZSE6 113 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 HSPB6O14558 160 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 HSD17B6O14756 317 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 OR7C1O76099 320 aaPredicted RBP5.44□□□□□ -1.54
SPG11-224ENST00000561268 IFNA1P01562 189 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 IFNA5P01569 189 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 IGHG2P01859 326 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 MBP02144 154 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 ATP6V0CP27449 155 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 PPT1P50897 306 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 RND2P52198 227 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 AKR1C2P52895 323 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 PRRX1P54821 245 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 HBG1P69891 147 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 HBG2P69892 147 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 AKR1C1Q04828 323 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 DIAPH2-AS1Q14236 149 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 HIST2H2BDQ6DRA6 164 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 SPSB3Q6PJ21 355 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 ETV3LQ6ZN32 361 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 SLC25A48Q6ZT89 311 aaKnown RBP5.44□□□□□ -1.54
SPG11-224ENST00000561268 REC114Q7Z4M0 266 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 TBC1D26Q86UD7 250 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 C11orf44Q8N8P7 122 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 OR4F17Q8NGA8 305 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 FAM110DQ8TAY7 271 aaPredicted RBP5.44□□□□□ -1.54
SPG11-224ENST00000561268 MRGPRDQ8TDS7 321 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 SECTM1Q8WVN6 248 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 RPEQ96AT9 228 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 TVP23CQ96ET8 276 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 OR4F4Q96R69 305 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 TP53RKQ96S44 253 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 CLCC1Q96S66 551 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 TXNDC17Q9BRA2 123 aa5.44□□□□□ -1.54
SPG11-224ENST00000561268 NIPSNAP3BQ9BS92 247 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms