RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 NANPQ8TBE9 248 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 PHYHIPLQ96FC7 376 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 CLCC1Q96S66 551 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 SSX3Q99909 188 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 GINS3Q9BRX5 216 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 PARD6GQ9BYG4 376 aaPredicted RBP8.95□□□□□ -0.98
SNX1-212ENST00000560861 ENY2Q9NPA8 101 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 C1RLQ9NZP8 487 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 MTORP42345 2549 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 IGHV7-81A0A0B4J1V7 117 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 RPS10-NUDT3A0A1W2PQS6 291 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 FGF16O43320 207 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 FBXO24O75426 580 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 IFNA10P01566 189 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 EGR2P11161 476 aaPredicted RBP8.94□□□□□ -0.98
SNX1-212ENST00000560861 AREGP15514 252 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 MFAP2P55001 183 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 HBG1P69891 147 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 HBG2P69892 147 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 RPP30P78346 268 aaKnown RBP8.94□□□□□ -0.98
SNX1-212ENST00000560861 CX3CL1P78423 397 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 DLK1P80370 383 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 ATP6V1FQ16864 119 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 ASPHD1Q5U4P2 390 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 ETV3LQ6ZN32 361 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 C5orf56Q8N8D9 126 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 SCARB1Q8WTV0 552 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 ZNF48Q96MX3 618 aaPredicted RBP8.94□□□□□ -0.98
SNX1-212ENST00000560861 P2RX4Q99571 388 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 TMEM147Q9BVK8 224 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 FAM96BQ9Y3D0 163 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 FBXO7Q9Y3I1 522 aa8.94□□□□□ -0.98
SNX1-212ENST00000560861 ANK3Q12955 4377 aaKnown RBP8.94□□□□□ -0.98
SNX1-212ENST00000560861 BORCS7-ASMTA0A0B4J1R7 106 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 H3BUX3 64 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 DFFBO76075 338 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 ACTL6BO94805 426 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 IFNA7P01567 189 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 OR8U8P0C7N1 319 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 OR13C7P0DN81 318 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 GNB1P62873 340 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 EIF5AP63241 154 aaKnown RBP8.93□□□□□ -0.98
SNX1-212ENST00000560861 ZNF266Q14584 549 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 FXYD3Q14802 87 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 PLGLAQ15195 96 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 OR8G2PQ6IF36 304 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 ALKAL2Q6UX46 152 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 HSD17B13Q7Z5P4 300 aaPredicted RBP8.93□□□□□ -0.98
SNX1-212ENST00000560861 OR10P1Q8NGE3 313 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 ARPC1AQ92747 370 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 PINX1Q96BK5 328 aaKnown RBP8.93□□□□□ -0.98
SNX1-212ENST00000560861 HSPB9Q9BQS6 159 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 SLC25A33Q9BSK2 321 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 MOB4Q9Y3A3 225 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 DMRT1Q9Y5R6 373 aa8.93□□□□□ -0.98
SNX1-212ENST00000560861 NCBP2LA6PVI3 153 aaKnown RBP8.92□□□□□ -0.98
SNX1-212ENST00000560861 FNDC10F2Z333 226 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 CRYGCP07315 174 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 FAM157CP0CG43 387 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 SPP1P10451 314 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 CTRB1P17538 263 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 IER3P46695 156 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 CRIP2P52943 208 aaPredicted RBP8.92□□□□□ -0.98
SNX1-212ENST00000560861 RAB11AP62491 216 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 ERHP84090 104 aaKnown RBP8.92□□□□□ -0.98
SNX1-212ENST00000560861 KLK9Q2XQG4 91 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 CTRB2Q6GPI1 263 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 Q6YL49 198 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 TMEM219Q86XT9 240 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 MRPL41Q8IXM3 137 aaKnown RBP8.92□□□□□ -0.98
SNX1-212ENST00000560861 GGACTQ9BVM4 153 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 WDR61Q9GZS3 305 aaKnown RBP8.92□□□□□ -0.98
SNX1-212ENST00000560861 UBQLN2Q9UHD9 624 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 KLK9Q9UKQ9 250 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 WDR83OSQ9Y284 106 aa8.92□□□□□ -0.98
SNX1-212ENST00000560861 F11RQ9Y624 299 aaKnown RBP8.92□□□□□ -0.98
SNX1-212ENST00000560861 IGHV4-59P01825 116 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 SEC11BP0C7V7 166 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 ATP6V0CP27449 155 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 CD69Q07108 199 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 C19orf54Q5BKX5 351 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 ARSJQ5FYB0 599 aaPredicted RBP8.91□□□□□ -0.98
SNX1-212ENST00000560861 C19orf35Q6ZS72 473 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 C16orf82Q7Z2V1 217 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 CENPVQ7Z7K6 275 aaPredicted RBP8.91□□□□□ -0.98
SNX1-212ENST00000560861 TEX29Q8N6K0 151 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 HSD17B11Q8NBQ5 300 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 OR1P1Q8NH06 330 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 TMED6Q8WW62 240 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 SSMEM1Q8WWF3 244 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 RASL11BQ9BPW5 248 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 FAM103A1Q9BTL3 118 aaKnown RBP8.91□□□□□ -0.98
SNX1-212ENST00000560861 SH3BGRL3Q9H299 93 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 UQCC1Q9NVA1 299 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 PAIP2BQ9ULR5 123 aaKnown RBP8.91□□□□□ -0.98
SNX1-212ENST00000560861 RFNGQ9Y644 331 aa8.91□□□□□ -0.98
SNX1-212ENST00000560861 UBE2L5PA0A1B0GUS4 154 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 LINC01548A6NM66 108 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 NPIPB5A8MRT5 1133 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 CNIH1O95406 144 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms