RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SYNJ2BPP57105 145 aa11.66□□□□□ -0.54
SNRPA1-213ENST00000560856 AARDQ4LEZ3 155 aa11.66□□□□□ -0.54
SNRPA1-213ENST00000560856 RBPMSQ93062 196 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-213ENST00000560856 PRR13Q9NZ81 148 aa11.66□□□□□ -0.54
SNRPA1-213ENST00000560856 PPP5D1E7EU14 171 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 INS-IGF2F8WCM5 200 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 ST8SIA3O43173 380 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 ATG12O94817 140 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 RPEL1Q2QD12 228 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 FAM209BQ5JX69 171 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 ZNF57Q68EA5 555 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 SLC25A24Q6NUK1 477 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 CLEC19AQ6UXS0 136 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 SGPP2Q8IWX5 399 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 OR9G4Q8NGQ1 327 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 ZNF502Q8TBZ5 544 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 MRAPQ8TCY5 172 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 GPR146Q96CH1 333 aa11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 RRNAD1Q96FB5 475 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 SLC25A21Q9BQT8 299 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-213ENST00000560856 K7EIM0 57 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 SAP30O75446 220 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 HLA-AP01891 365 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 AKR1C4P17516 323 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 CNPY1Q3B7I2 92 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 ADAMTSL5Q6ZMM2 481 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 FAM219AQ8IW50 185 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 ZNF114Q8NC26 417 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 OR1P1Q8NH06 330 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 VN1R17PQ8TDU5 208 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 IL22RA2Q969J5 263 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 EEF1AKMT3Q96AZ1 226 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 CXorf58Q96LI9 332 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 ZMAT5Q9UDW3 170 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
SNRPA1-213ENST00000560856 DNAH9Q9NYC9 4486 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 TRBV7-1A0A0A6YYK4 115 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 F8W735 103 aaPredicted RBP11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 GGCTO75223 188 aaKnown RBP11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 OR2C1O95371 312 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 CLEC3BP05452 202 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 CSN3P07498 182 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 IL7P13232 177 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 BTCP35070 178 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 CCR6P51684 374 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 TMEM128Q5BJH2 165 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 SPINK9Q5DT21 86 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 TRIQKQ629K1 86 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 PVRIGQ6DKI7 326 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 LINC00299Q6ZSB3 139 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 GPHB5Q86YW7 130 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 THYN1Q9P016 225 aa11.63□□□□□ -0.55
SNRPA1-213ENST00000560856 IGLV1-51P01701 117 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 MECP2P51608 486 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 NMSQ5H8A3 153 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 HAPLN4Q86UW8 402 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 SLC35G3Q8N808 338 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 OR1L6Q8NGR2 347 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 SCARB1Q8WTV0 552 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 OR4C12Q96R67 309 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 PRR25Q96S07 402 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 ELOVL1Q9BW60 279 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 PLEKHA3Q9HB20 300 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 SIGLEC8Q9NYZ4 499 aa11.62□□□□□ -0.55
SNRPA1-213ENST00000560856 IGHV3-21A0A0B4J1V1 117 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 A0A0B4J2A0 478 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 NAP1L6A6NFF2 107 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 I3L2K1 104 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 LGALS9O00182 355 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 PLA2G10O15496 165 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 CYB5BO43169 146 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 IFNA17P01571 189 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 SPNP16150 400 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 ARL3P36405 182 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 ERHP84090 104 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 RBMS2Q15434 407 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 TATDN3Q17R31 274 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 LYZL2Q7Z4W2 148 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 TMED4Q7Z7H5 227 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 OR52E5Q8NH55 327 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 RNASE11Q8TAA1 199 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 ZNF414Q96IQ9 312 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 CACNG5Q9UF02 275 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 SHPKQ9UHJ6 478 aa11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 ZNF256Q9Y2P7 627 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 LSM4Q9Y4Z0 139 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-213ENST00000560856 LINC00854A0A1B0GVQ3 168 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 NDUFB6O95139 128 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 EDN2P20800 178 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 GPR183P32249 361 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 SPCS3P61009 180 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 BSXQ3C1V8 233 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 ANKRD55Q3KP44 614 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 LGI3Q8N145 548 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 LRTM2Q8N967 370 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 ATP6V0BQ99437 205 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 C7orf50Q9BRJ6 194 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms