RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 V9GYH0 126 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 IGHV3-21A0A0B4J1V1 117 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 TEX50A0A1B0GTY4 177 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 NPIPB5A8MRT5 1133 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 TEX22C9J3V5 150 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 E7EUB6 86 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 ZNF735P0CB33 412 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 HIST1H1BP16401 226 aaKnown RBP6.18□□□□□ -1.42
LRRC28-219ENST00000560483 PTBP1P26599 531 aaKnown RBP eCLIP6.18□□□□□ -1.42
LRRC28-219ENST00000560483 DHODHQ02127 395 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 SURF2Q15527 256 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-219ENST00000560483 POU2AF1Q16633 256 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 IZUMO4Q1ZYL8 232 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 MRGPRG-AS1Q2M3A8 158 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 ZNF585BQ52M93 769 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 TMEM268Q5VZI3 342 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 THOC7Q6I9Y2 204 aaKnown RBP6.18□□□□□ -1.42
LRRC28-219ENST00000560483 HSD17B13Q7Z5P4 300 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-219ENST00000560483 CCDC190Q86UF4 302 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 UBAC2Q8NBM4 344 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 NECAP1Q8NC96 275 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 WFDC9Q8NEX5 89 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 OR10W1Q8NGF6 305 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 MYOZ3Q8TDC0 251 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 DLX4Q92988 240 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-219ENST00000560483 LSM10Q969L4 123 aaKnown RBP6.18□□□□□ -1.42
LRRC28-219ENST00000560483 EEF1AKMT3Q96AZ1 226 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 C5orf66Q9H5L9 145 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 PLEKHA3Q9HB20 300 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 ZC4H2Q9NQZ6 224 aa6.18□□□□□ -1.42
LRRC28-219ENST00000560483 FAM212BQ9NTI7 297 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-219ENST00000560483 ZNF320A2RRD8 509 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 C15orf61A6NNL5 157 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 PPP5D1E7EU14 171 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 B3GALNT1O75752 331 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 NXPH3O95157 252 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 FGF2P09038 288 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 ARL3P36405 182 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 SNCAP37840 140 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 SYNJ2BPP57105 145 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 ERHP84090 104 aaKnown RBP6.17□□□□□ -1.42
LRRC28-219ENST00000560483 RUNX1Q01196 453 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 ZNF45Q02386 682 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 KLF9Q13886 244 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-219ENST00000560483 KIAA0141Q14154 515 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-219ENST00000560483 ZNF79Q15937 498 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 BEAN1Q3B7T3 259 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 Q56UQ5 140 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 CLEC19AQ6UXS0 136 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 GDPD1Q8N9F7 314 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 OR5B3Q8NH48 314 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 PINX1Q96BK5 328 aaKnown RBP6.17□□□□□ -1.42
LRRC28-219ENST00000560483 SEC22AQ96IW7 307 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 RTBDNQ9BSG5 229 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-219ENST00000560483 SRRQ9GZT4 340 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 TMEM222Q9H0R3 208 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 PRR13Q9NZ81 148 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 GPR132Q9UNW8 380 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 NOTCH1P46531 2555 aa6.17□□□□□ -1.42
LRRC28-219ENST00000560483 CRYM-AS1A6NIL9 109 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 CEBPZOSA8MTT3 80 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 NDUFB8O95169 186 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 IGKV1-39P01597 117 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 TRBV12-3P01733 135 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 IGKV1D-39P04432 117 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 CTRB1P17538 263 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 UCP1P25874 307 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 ETV6P41212 452 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 CCR6P51684 374 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 HSPE1P61604 102 aaKnown RBP6.16□□□□□ -1.42
LRRC28-219ENST00000560483 FHL3Q13643 280 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 RBMS2Q15434 407 aaKnown RBP6.16□□□□□ -1.42
LRRC28-219ENST00000560483 CNPY1Q3B7I2 92 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 CTRB2Q6GPI1 263 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 REC114Q7Z4M0 266 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 ZNF429Q86V71 674 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 CENPSQ8N2Z9 138 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 DYNLRB2Q8TF09 96 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 RBPMSQ93062 196 aaKnown RBP6.16□□□□□ -1.42
LRRC28-219ENST00000560483 TRIM63Q969Q1 353 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 CXorf58Q96LI9 332 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 SOSTQ9BQB4 213 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 NDUFA4L2Q9NRX3 87 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 AURKAIP1Q9NWT8 199 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-219ENST00000560483 SLC2A8Q9NY64 477 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 PEMTQ9UBM1 199 aa6.16□□□□□ -1.42
LRRC28-219ENST00000560483 IGHV3-35A0A0C4DH35 117 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 A0A1B0GW64 132 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 IGLC7A0M8Q6 106 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 NAP1L6A6NFF2 107 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 ST8SIA3O43173 380 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 IGKV1-5P01602 117 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 HLA-AP01891 365 aaKnown RBP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 CLEC3BP05452 202 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 CRYGCP07315 174 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 MED14OSP0DP75 135 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 GPR183P32249 361 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 SUB1P53999 127 aaKnown RBP eCLIP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 LINC00310P59036 64 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 SRPXP78539 464 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms