RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 TMEM187Q14656 261 aa17.77■□□□□ 0.44
CRNDE-209ENST00000560208 ZNF846Q147U1 533 aa17.77■□□□□ 0.44
CRNDE-209ENST00000560208 RBPMSQ93062 196 aaKnown RBP17.77■□□□□ 0.44
CRNDE-209ENST00000560208 WDR12Q9GZL7 423 aaKnown RBP17.77■□□□□ 0.44
CRNDE-209ENST00000560208 PEF1Q9UBV8 284 aaKnown RBP17.77■□□□□ 0.44
CRNDE-209ENST00000560208 A0A0G2JRQ6 117 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 IGLC7A0M8Q6 106 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 PLA2G10O15496 165 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 ANXA3P12429 323 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 DEFA4P12838 97 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 VAMP1P23763 118 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 BTCP35070 178 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 SUPT4H1P63272 117 aaKnown RBP17.76■□□□□ 0.43
CRNDE-209ENST00000560208 HAPLN4Q86UW8 402 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 CENPSQ8N2Z9 138 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 OR5B3Q8NH48 314 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 GALNT14Q96FL9 552 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 NDUFA4L2Q9NRX3 87 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 TMEM14BQ9NUH8 114 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 FLVCR2Q9UPI3 526 aa17.76■□□□□ 0.43
CRNDE-209ENST00000560208 LYRM1O43325 122 aa17.75■□□□□ 0.43
CRNDE-209ENST00000560208 NDUFB6O95139 128 aa17.75■□□□□ 0.43
CRNDE-209ENST00000560208 OR13C7P0DN81 318 aa17.75■□□□□ 0.43
CRNDE-209ENST00000560208 CTRB1P17538 263 aa17.75■□□□□ 0.43
CRNDE-209ENST00000560208 SPINK9Q5DT21 86 aa17.75■□□□□ 0.43
CRNDE-209ENST00000560208 CTRB2Q6GPI1 263 aa17.75■□□□□ 0.43
CRNDE-209ENST00000560208 LSM10Q969L4 123 aaKnown RBP17.75■□□□□ 0.43
CRNDE-209ENST00000560208 KMT2CQ8NEZ4 4911 aaKnown RBP17.74■□□□□ 0.43
CRNDE-209ENST00000560208 DHFRP00374 187 aa17.74■□□□□ 0.43
CRNDE-209ENST00000560208 IGLV1-51P01701 117 aa17.74■□□□□ 0.43
CRNDE-209ENST00000560208 TRBV12-3P01733 135 aa17.74■□□□□ 0.43
CRNDE-209ENST00000560208 CRYGCP07315 174 aa17.74■□□□□ 0.43
CRNDE-209ENST00000560208 P0C879 139 aa17.74■□□□□ 0.43
CRNDE-209ENST00000560208 TMEM128Q5BJH2 165 aa17.74■□□□□ 0.43
CRNDE-209ENST00000560208 THOC7Q6I9Y2 204 aaKnown RBP17.74■□□□□ 0.43
CRNDE-209ENST00000560208 TMEM56Q96MV1 263 aa17.74■□□□□ 0.43
CRNDE-209ENST00000560208 SRSF8Q9BRL6 282 aaKnown RBP17.74■□□□□ 0.43
CRNDE-209ENST00000560208 TMEM56-RWDD3S4R434 201 aa17.74■□□□□ 0.43
CRNDE-209ENST00000560208 HUWE1Q7Z6Z7 4374 aaKnown RBP17.73■□□□□ 0.43
CRNDE-209ENST00000560208 A0A0B4J293 547 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 SYNJ2BPP57105 145 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 ATP5G2Q06055 141 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 WT1-ASQ06250 92 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 SLC35G3Q8N808 338 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 OR9G4Q8NGQ1 327 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 GPR146Q96CH1 333 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 PDCD10Q9BUL8 212 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 FBXL7Q9UJT9 491 aa17.73■□□□□ 0.43
CRNDE-209ENST00000560208 TRBV9A0A0B4J1U6 114 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 FAM223BA6NKX1 122 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 IFNA17P01571 189 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 HSPE1P61604 102 aaKnown RBP17.72■□□□□ 0.43
CRNDE-209ENST00000560208 PPP1R1AQ13522 171 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 EXOSC2Q13868 293 aaKnown RBP17.72■□□□□ 0.43
CRNDE-209ENST00000560208 TATDN3Q17R31 274 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 SBSPONQ8IVN8 264 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 FAM219AQ8IW50 185 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 FAM223AQ8IWN6 122 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 LGI3Q8N145 548 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 FANCD2OSQ96PS1 177 aa17.72■□□□□ 0.43
CRNDE-209ENST00000560208 ST8SIA3O43173 380 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 NDUFB8O95169 186 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 SFT2D2O95562 160 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 FRMD6-AS1P0C7T7 363 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 RPEL1Q2QD12 228 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 C15orf32Q32M92 178 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 IL34Q6ZMJ4 242 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 Q6ZRM9 215 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 LYZL2Q7Z4W2 148 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 HSD17B13Q7Z5P4 300 aaPredicted RBP17.71■□□□□ 0.43
CRNDE-209ENST00000560208 NECAP1Q8NC96 275 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 IL22RA2Q969J5 263 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 CACNG5Q9UF02 275 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 S4R3C0 116 aa17.71■□□□□ 0.43
CRNDE-209ENST00000560208 IGHV3-23P01764 117 aa17.7■□□□□ 0.42
CRNDE-209ENST00000560208 HIST1H1BP16401 226 aaKnown RBP17.7■□□□□ 0.42
CRNDE-209ENST00000560208 SRPXP78539 464 aa17.7■□□□□ 0.42
CRNDE-209ENST00000560208 PRCDQ00LT1 54 aa17.7■□□□□ 0.42
CRNDE-209ENST00000560208 ANKRD55Q3KP44 614 aa17.7■□□□□ 0.42
CRNDE-209ENST00000560208 PLEKHA3Q9HB20 300 aa17.7■□□□□ 0.42
CRNDE-209ENST00000560208 IGLV11-55A0A075B6I3 123 aa17.69■□□□□ 0.42
CRNDE-209ENST00000560208 NXPH3O95157 252 aa17.69■□□□□ 0.42
CRNDE-209ENST00000560208 ANXA7P20073 488 aaKnown RBP17.69■□□□□ 0.42
CRNDE-209ENST00000560208 SLC25A24Q6NUK1 477 aa17.69■□□□□ 0.42
CRNDE-209ENST00000560208 TBC1D24Q9ULP9 559 aa17.69■□□□□ 0.42
CRNDE-209ENST00000560208 A0A0B4J2A0 478 aa17.68■□□□□ 0.42
CRNDE-209ENST00000560208 UPK1BO75841 260 aa17.68■□□□□ 0.42
CRNDE-209ENST00000560208 CSN3P07498 182 aa17.68■□□□□ 0.42
CRNDE-209ENST00000560208 HOXA1P49639 335 aaPredicted RBP17.68■□□□□ 0.42
CRNDE-209ENST00000560208 Q8N1Y9 231 aa17.68■□□□□ 0.42
CRNDE-209ENST00000560208 C20orf85Q9H1P6 137 aa17.68■□□□□ 0.42
CRNDE-209ENST00000560208 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.68■□□□□ 0.42
CRNDE-209ENST00000560208 SHPKQ9UHJ6 478 aa17.68■□□□□ 0.42
CRNDE-209ENST00000560208 DMRT1Q9Y5R6 373 aa17.68■□□□□ 0.42
CRNDE-209ENST00000560208 BMPR1BO00238 502 aa17.67■□□□□ 0.42
CRNDE-209ENST00000560208 HLA-AP01891 365 aaKnown RBP17.67■□□□□ 0.42
CRNDE-209ENST00000560208 C4orf46Q504U0 113 aa17.67■□□□□ 0.42
CRNDE-209ENST00000560208 ENY2Q9NPA8 101 aa17.67■□□□□ 0.42
CRNDE-209ENST00000560208 F11RQ9Y624 299 aaKnown RBP17.67■□□□□ 0.42
CRNDE-209ENST00000560208 TRAV6A0A075B6T7 132 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms