RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SLC24A4Q8NFF2 622 aa8.22□□□□□ -1.09
TPM1-221ENST00000559831 OR5T1Q8NG75 326 aa8.22□□□□□ -1.09
TPM1-221ENST00000559831 OR11H4Q8NGC9 324 aa8.22□□□□□ -1.09
TPM1-221ENST00000559831 NOL4LQ96MY1 436 aaPredicted RBP8.22□□□□□ -1.09
TPM1-221ENST00000559831 OR4C12Q96R67 309 aa8.22□□□□□ -1.09
TPM1-221ENST00000559831 SRSF8Q9BRL6 282 aaKnown RBP8.22□□□□□ -1.09
TPM1-221ENST00000559831 STRAPQ9Y3F4 350 aaKnown RBP8.22□□□□□ -1.09
TPM1-221ENST00000559831 MXRA5Q9NR99 2828 aa8.21□□□□□ -1.09
TPM1-221ENST00000559831 TRAV41A0A0B4J266 112 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 BOLA2-SMG1P6H3BVE0 249 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 AP4M1O00189 453 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 ARPC5O15511 151 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 TSC22D2O75157 780 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 LY86O95711 162 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 OR8U8P0C7N1 319 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 METTL15P1P0C7V9 234 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 RNASE2P10153 161 aaKnown RBP8.21□□□□□ -1.1
TPM1-221ENST00000559831 DEFA4P12838 97 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 LYL1P12980 280 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 NPY1RP25929 384 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 HTR2BP41595 481 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 P2RY1P47900 373 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 SUB1P53999 127 aaKnown RBP eCLIP8.21□□□□□ -1.1
TPM1-221ENST00000559831 TAS2R30P59541 319 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 Q6ZSV7 163 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 ZNF546Q86UE3 836 aa8.21□□□□□ -1.1
TPM1-221ENST00000559831 INO80EQ8NBZ0 244 aaPredicted RBP8.21□□□□□ -1.1
TPM1-221ENST00000559831 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
TPM1-221ENST00000559831 C15orf62A8K5M9 175 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 NPIPB5A8MRT5 1133 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 INS-IGF2F8WCM5 200 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 FBXO24O75426 580 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 CST7O76096 145 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 PRH1P02810 166 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 IFNA4P05014 189 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 IGF1P05019 195 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 HNRNPCP07910 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
TPM1-221ENST00000559831 CTRB1P17538 263 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 RPL12P30050 165 aaKnown RBP8.2□□□□□ -1.1
TPM1-221ENST00000559831 EIF2B2P49770 351 aaKnown RBP8.2□□□□□ -1.1
TPM1-221ENST00000559831 NKX2-5P52952 324 aaPredicted RBP8.2□□□□□ -1.1
TPM1-221ENST00000559831 AP2S1P53680 142 aaPredicted RBP8.2□□□□□ -1.1
TPM1-221ENST00000559831 RAB11AP62491 216 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 AKIRIN2Q53H80 203 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 CTRB2Q6GPI1 263 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 OR8G2PQ6IF36 304 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 SLC25A24Q6NUK1 477 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 NOXA1Q86UR1 476 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 STX12Q86Y82 276 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 STPG2Q8N412 459 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 TTC9CQ8N5M4 171 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 TMEM252Q8N6L7 170 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 OR2T6Q8NHC8 308 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 FAM110DQ8TAY7 271 aaPredicted RBP8.2□□□□□ -1.1
TPM1-221ENST00000559831 MISP3Q96FF7 219 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 HYLS1Q96M11 299 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 P2RX4Q99571 388 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 WNT10AQ9GZT5 417 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 SLC25A31Q9H0C2 315 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 ZNF355PQ9NSJ1 428 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 TNFSF18Q9UNG2 199 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 U3KQ87 197 aa8.2□□□□□ -1.1
TPM1-221ENST00000559831 HKR1P10072 659 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 CRIP2P52943 208 aaPredicted RBP8.19□□□□□ -1.1
TPM1-221ENST00000559831 RPL15P61313 204 aaKnown RBP8.19□□□□□ -1.1
TPM1-221ENST00000559831 EWSR1Q01844 656 aaKnown RBP eCLIP8.19□□□□□ -1.1
TPM1-221ENST00000559831 C2orf83Q53S99 150 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 TMEM65Q6PI78 240 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 TMEM14EPQ6UXP3 125 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 ETV3LQ6ZN32 361 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 Q8N2B8 174 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 TMEM217Q8N7C4 229 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 ZNF114Q8NC26 417 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 TMEM170AQ8WVE7 144 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 PINX1Q96BK5 328 aaKnown RBP8.19□□□□□ -1.1
TPM1-221ENST00000559831 TMEM68Q96MH6 324 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 SMIM3Q9BZL3 60 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 MFFQ9GZY8 342 aa8.19□□□□□ -1.1
TPM1-221ENST00000559831 F11RQ9Y624 299 aaKnown RBP8.19□□□□□ -1.1
TPM1-221ENST00000559831 TEP1Q99973 2627 aaKnown RBP8.18□□□□□ -1.1
TPM1-221ENST00000559831 IGHV3-21A0A0B4J1V1 117 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 RNF222A6NCQ9 220 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 HMSDA8MTL9 139 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 CYB5BO43169 146 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 TSPAN9O75954 239 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 CRYGCP07315 174 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 SULT1A1P50225 295 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 MFAP2P55001 183 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 DEFA5Q01523 94 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 NHLH2Q02577 135 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 BSXQ3C1V8 233 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 C19orf54Q5BKX5 351 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 ACOT7LQ6ZUV0 252 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 ZNF329Q86UD4 541 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 HAPLN4Q86UW8 402 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 OR1P1Q8NH06 330 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 BSCL2Q96G97 398 aaPredicted RBP8.18□□□□□ -1.1
TPM1-221ENST00000559831 MS4A10Q96PG2 267 aa8.18□□□□□ -1.1
TPM1-221ENST00000559831 AQP10Q96PS8 301 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms