RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 FCGR2BP31994 310 aaPredicted RBP9.65□□□□□ -0.86
TPM1-220ENST00000559556 LGALS9CQ6DKI2 356 aa9.65□□□□□ -0.86
TPM1-220ENST00000559556 RPP25LQ8N5L8 163 aaKnown RBP9.65□□□□□ -0.86
TPM1-220ENST00000559556 PHLDA1Q8WV24 401 aaPredicted RBP9.65□□□□□ -0.86
TPM1-220ENST00000559556 C20orf24Q9BUV8 137 aa9.65□□□□□ -0.86
TPM1-220ENST00000559556 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
TPM1-220ENST00000559556 DIABLOQ9NR28 239 aa9.65□□□□□ -0.86
TPM1-220ENST00000559556 BATF3Q9NR55 127 aa9.65□□□□□ -0.86
TPM1-220ENST00000559556 DNAH2Q9P225 4427 aa9.65□□□□□ -0.87
TPM1-220ENST00000559556 IGHV3-21A0A0B4J1V1 117 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 ZNF207O43670 478 aaKnown RBP9.64□□□□□ -0.87
TPM1-220ENST00000559556 FCER2P06734 321 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 CTSGP08311 255 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 NEDD8Q15843 81 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 IDNKQ5T6J7 187 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 DHRS11Q6UWP2 260 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 GATAD1Q8WUU5 269 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 FCAMRQ8WWV6 532 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 MOB3AQ96BX8 217 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 OR10C1Q96KK4 312 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 HINT2Q9BX68 163 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 C6orf62Q9GZU0 229 aaPredicted RBP9.64□□□□□ -0.87
TPM1-220ENST00000559556 RNF167Q9H6Y7 350 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 EHFQ9NZC4 300 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 NDUFA13Q9P0J0 144 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 SMPXQ9UHP9 88 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 ANAPC10Q9UM13 185 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 OR51B2Q9Y5P1 312 aa9.64□□□□□ -0.87
TPM1-220ENST00000559556 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 MEIS3P1A6NDR6 274 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 TMEM127O75204 238 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 KRASP01116 189 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 ALDH3B2P48448 385 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 Q56UQ5 140 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 GPR141Q7Z602 305 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 APRG1Q8IVJ8 170 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 UBAC2Q8NBM4 344 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 OR5B3Q8NH48 314 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 DGCR14Q96DF8 476 aaKnown RBP9.63□□□□□ -0.87
TPM1-220ENST00000559556 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 RNF2Q99496 336 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 FXYD6Q9H0Q3 95 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 C11orf68Q9H3H3 251 aaKnown RBP9.63□□□□□ -0.87
TPM1-220ENST00000559556 IFT46Q9NQC8 304 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 TMEM14BQ9NUH8 114 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 NSG2Q9Y328 171 aa9.63□□□□□ -0.87
TPM1-220ENST00000559556 LOC100506127A0A0U1RQW1 187 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 C15orf61A6NNL5 157 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 CHEK1O14757 476 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 XRCC3O43542 346 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 PGLYRP1O75594 196 aaPredicted RBP9.62□□□□□ -0.87
TPM1-220ENST00000559556 DEDDO75618 318 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 SNAPC5O75971 98 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 G6PCP35575 357 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 LPAR6P43657 344 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 RFX2P48378 723 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 RELQ04864 619 aaPredicted RBP9.62□□□□□ -0.87
TPM1-220ENST00000559556 ZNF124Q15973 351 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 OR1P1Q8NH06 330 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 ZNF2Q9BSG1 426 aaPredicted RBP9.62□□□□□ -0.87
TPM1-220ENST00000559556 RHPN1-AS1Q9BWJ2 59 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 CSTL1Q9H114 145 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 FKBP11Q9NYL4 201 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 PRNDQ9UKY0 176 aa9.62□□□□□ -0.87
TPM1-220ENST00000559556 PKD1P98161 4303 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 DBX1A6NMT0 343 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 MPTX1A8MV57 137 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 NAT1P18440 290 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 CMC4P56277 68 aaPredicted RBP9.61□□□□□ -0.87
TPM1-220ENST00000559556 FAM90A2PQ658T7 463 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 CMTM1Q8IZ96 169 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 ZNF114Q8NC26 417 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 TMEM116Q8NCL8 245 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 TSC22D3Q99576 134 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 TXN2Q99757 166 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 RARRES2Q99969 163 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 MFFQ9GZY8 342 aa9.61□□□□□ -0.87
TPM1-220ENST00000559556 FAM212BQ9NTI7 297 aaPredicted RBP9.61□□□□□ -0.87
TPM1-220ENST00000559556 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
TPM1-220ENST00000559556 SMIM31A0A1B0GVY4 71 aa9.6□□□□□ -0.87
TPM1-220ENST00000559556 I3L2K1 104 aa9.6□□□□□ -0.87
TPM1-220ENST00000559556 GPR31O00270 319 aa9.6□□□□□ -0.87
TPM1-220ENST00000559556 NUPL2O15504 423 aaKnown RBP9.6□□□□□ -0.87
TPM1-220ENST00000559556 MFAP4P55083 255 aa9.6□□□□□ -0.87
TPM1-220ENST00000559556 TAS2R46P59540 309 aa9.6□□□□□ -0.87
TPM1-220ENST00000559556 UBE2NLQ5JXB2 153 aa9.6□□□□□ -0.87
TPM1-220ENST00000559556 OR5H2Q8NGV7 314 aa9.6□□□□□ -0.87
TPM1-220ENST00000559556 NXF2Q9GZY0 626 aaKnown RBP9.6□□□□□ -0.87
TPM1-220ENST00000559556 IGHV3-49A0A0A0MS15 119 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 NOL3O60936 208 aaKnown RBP9.59□□□□□ -0.87
TPM1-220ENST00000559556 CD5P06127 495 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 TFPI2P48307 235 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 NANOS2P60321 138 aaKnown RBP9.59□□□□□ -0.87
TPM1-220ENST00000559556 RBMS2Q15434 407 aaKnown RBP9.59□□□□□ -0.87
TPM1-220ENST00000559556 CROCCP3Q8IVE0 287 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 OR11H2Q8NH07 326 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 C11orf45Q8TAV5 145 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 MISP3Q96FF7 219 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 S100A16Q96FQ6 103 aaKnown RBP9.59□□□□□ -0.87
TPM1-220ENST00000559556 SEC22AQ96IW7 307 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms