RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 NMSQ5H8A3 153 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 ZNF343Q6P1L6 599 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 FAM223AQ8IWN6 122 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 LRTM2Q8N967 370 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 CACNG5Q9UF02 275 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 ANKRD34BA5PLL1 514 aa15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 IFNA17P01571 189 aa15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 HSPB1P04792 205 aaKnown RBP15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 OR4E1P0C645 316 aa15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 HIST1H1BP16401 226 aaKnown RBP15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 MECP2P51608 486 aaKnown RBP15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 MZT2BQ6NZ67 158 aa15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 OR2C3Q8N628 320 aa15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 DPF1Q92782 380 aa15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 C20orf85Q9H1P6 137 aa15.65■□□□□ 0.1
TSPAN3-207ENST00000559494 FAM240BA0A1B0GVZ2 78 aa15.64■□□□□ 0.09
TSPAN3-207ENST00000559494 MFAP2P55001 183 aa15.64■□□□□ 0.09
TSPAN3-207ENST00000559494 C15orf32Q32M92 178 aa15.64■□□□□ 0.09
TSPAN3-207ENST00000559494 F11RQ9Y624 299 aaKnown RBP15.64■□□□□ 0.09
TSPAN3-207ENST00000559494 TRAV6A0A075B6T7 132 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 DUXBA0A1W2PPF3 345 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 LINC01619G3V211 115 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 TRBV12-3P01733 135 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 RAB25P57735 213 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 DHRS2Q13268 280 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 SLC25A24Q6NUK1 477 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 LYG2Q86SG7 212 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 PLEKHA3Q9HB20 300 aa15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 PEF1Q9UBV8 284 aaKnown RBP15.63■□□□□ 0.09
TSPAN3-207ENST00000559494 HLA-AP01891 365 aaKnown RBP15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 OR8U8P0C7N1 319 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 SULT1A3P0DMM9 295 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 SULT1A4P0DMN0 295 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 IGLL1P15814 213 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 SLURP1P55000 103 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 SPCS3P61009 180 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 EXOSC2Q13868 293 aaKnown RBP15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 OR52E5Q8NH55 327 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 PDCD10Q9BUL8 212 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 RANGRFQ9HD47 186 aaPredicted RBP15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 S4R3C0 116 aa15.62■□□□□ 0.09
TSPAN3-207ENST00000559494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 PIGBOS1A0A0B4J2F0 54 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 INS-IGF2F8WCM5 200 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 G3V4G9 280 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 IGHV3-23P01764 117 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 HOXB5P09067 269 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 ERHP84090 104 aaKnown RBP15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 SMCO1Q147U7 214 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 C4orf46Q504U0 113 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 OXLD1Q5BKU9 147 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 DCUN1D4Q92564 292 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 DLX4Q92988 240 aaPredicted RBP15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 NUDT15Q9NV35 164 aa15.61■□□□□ 0.09
TSPAN3-207ENST00000559494 A0A1B0GU03 582 aa15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 MFSD2BA6NFX1 497 aa15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 DUS4LO95620 317 aaKnown RBP15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 H2AFB2P0C5Z0 115 aa15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 PDLIM3Q53GG5 364 aaPredicted RBP15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 SAMD5Q5TGI4 173 aa15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 NRARPQ7Z6K4 114 aa15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 OR52B4Q8NGK2 314 aa15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 OR1P1Q8NH06 330 aa15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 TMED3Q9Y3Q3 217 aa15.6■□□□□ 0.09
TSPAN3-207ENST00000559494 NXPH3O95157 252 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 DEFA1P59665 94 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 DEFA3P59666 94 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 GGNBP1Q5YKI7 109 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 C1QL4Q86Z23 238 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 ZNF114Q8NC26 417 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 OR1L6Q8NGR2 347 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 ENKURQ8TC29 256 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 RCC1LQ96I51 464 aaKnown RBP15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 THYN1Q9P016 225 aa15.59■□□□□ 0.09
TSPAN3-207ENST00000559494 CYB5BO43169 146 aa15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 PITX3O75364 302 aa15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 HOXD3P31249 432 aaPredicted RBP15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 HOXA1P49639 335 aaPredicted RBP15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 DUSP18Q8NEJ0 188 aa15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 COQ8AQ8NI60 647 aa15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 EEF1AKMT3Q96AZ1 226 aa15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 CXorf58Q96LI9 332 aa15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 CCDC140Q96MF4 163 aa15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 ENY2Q9NPA8 101 aa15.58■□□□□ 0.08
TSPAN3-207ENST00000559494 IGHV3-21A0A0B4J1V1 117 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 K7EIM0 57 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 BMPR1BO00238 502 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 ADAP1O75689 374 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 RNASE2P10153 161 aaKnown RBP15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 SLC25A6P12236 298 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 SNCAP37840 140 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 TNFRSF9Q07011 255 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 CLEC19AQ6UXS0 136 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 OR1S1Q8NH92 325 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 VN1R17PQ8TDU5 208 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 MITD1Q8WV92 249 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 SEC22CQ9BRL7 303 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 HSPB7Q9UBY9 170 aa15.57■□□□□ 0.08
TSPAN3-207ENST00000559494 CEBPZOSA8MTT3 80 aa15.56■□□□□ 0.08
TSPAN3-207ENST00000559494 PPP5D1E7EU14 171 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms