RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 CHEK1O14757 476 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 DEFB4AO15263 64 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 ALDH3B2P48448 385 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 FXYD4P59646 89 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 TMEM116Q8NCL8 245 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 ZNF414Q96IQ9 312 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 HINT2Q9BX68 163 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 NDUFA4L2Q9NRX3 87 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 APLNQ9ULZ1 77 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 PKHD1P08F94 4074 aa11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 IGHV3-49A0A0A0MS15 119 aa11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 CTSGP08311 255 aa11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 AADACL3Q5VUY0 350 aa11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 HOGA1Q86XE5 327 aa11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 LGALS14Q8TCE9 139 aa11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 LSM10Q969L4 123 aaKnown RBP11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 DAPK2Q9UIK4 370 aa11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 RYR1P21817 5038 aa11.88□□□□□ -0.51
CDC42BPB-205ENST00000559245 FAT2Q9NYQ8 4349 aa11.87□□□□□ -0.51
CDC42BPB-205ENST00000559245 IGLL5B9A064 214 aa11.87□□□□□ -0.51
CDC42BPB-205ENST00000559245 CA1P00915 261 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPB-205ENST00000559245 ERVK-16P61578 105 aa11.87□□□□□ -0.51
CDC42BPB-205ENST00000559245 TMEM17Q86X19 198 aa11.87□□□□□ -0.51
CDC42BPB-205ENST00000559245 GBGT1Q8N5D6 347 aa11.87□□□□□ -0.51
CDC42BPB-205ENST00000559245 CMTM3Q96MX0 182 aa11.87□□□□□ -0.51
CDC42BPB-205ENST00000559245 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
CDC42BPB-205ENST00000559245 TRAV18A0A075B6X5 111 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 MARCH11A6NNE9 402 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 NUPL2O15504 423 aaKnown RBP11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 YIF1AO95070 293 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 FCER2P06734 321 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 RELQ04864 619 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 TMEM187Q14656 261 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 FAM90A2PQ658T7 463 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 OR10C1Q96KK4 312 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 TXNL4BQ9NX01 149 aaKnown RBP11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 NSG2Q9Y328 171 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 DNAH2Q9P225 4427 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 DNAH17Q9UFH2 4485 aa11.86□□□□□ -0.51
CDC42BPB-205ENST00000559245 IGHV3OR16-13A0A075B7E8 117 aa11.85□□□□□ -0.51
CDC42BPB-205ENST00000559245 IGHV3-74A0A0B4J1X5 117 aa11.85□□□□□ -0.51
CDC42BPB-205ENST00000559245 C11orf94C9JXX5 98 aa11.85□□□□□ -0.51
CDC42BPB-205ENST00000559245 FGF9P31371 208 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-205ENST00000559245 RPL5P46777 297 aaKnown RBP11.85□□□□□ -0.51
CDC42BPB-205ENST00000559245 SFXN4Q6P4A7 337 aa11.85□□□□□ -0.51
CDC42BPB-205ENST00000559245 TPRA1Q86W33 373 aa11.85□□□□□ -0.51
CDC42BPB-205ENST00000559245 GIMAP1Q8WWP7 306 aa11.85□□□□□ -0.51
CDC42BPB-205ENST00000559245 TRAV14DV4A0A0A6YYC5 116 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 XRCC3O43542 346 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 SNAPC5O75971 98 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 KRASP01116 189 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 F2RP25116 425 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 GNRHRP30968 328 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 PAFAH1B2P68402 229 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 TCF24Q7RTU0 167 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 BORCS5Q969J3 196 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 DGCR14Q96DF8 476 aaKnown RBP11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 TMEM56Q96MV1 263 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 VCX3AQ9NNX9 186 aa11.84□□□□□ -0.51
CDC42BPB-205ENST00000559245 C15orf61A6NNL5 157 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 RLN1P04808 185 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 LPAR6P43657 344 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 MFAP4P55083 255 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 HERV-K104P61576 105 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 LINC00336Q6ZUF6 198 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 Q8NAQ8 132 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 OR5AP2Q8NGF4 316 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 OR5H6Q8NGV6 325 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 OR1P1Q8NH06 330 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 FCAMRQ8WWV6 532 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 SLC25A46Q96AG3 418 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 SLC25A38Q96DW6 304 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 NXF2Q9GZY0 626 aaKnown RBP11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 HRH4Q9H3N8 390 aa11.83□□□□□ -0.52
CDC42BPB-205ENST00000559245 I3L2K1 104 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 EIF4EP06730 217 aaKnown RBP11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 G6PCP35575 357 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 DEFB131AP59861 70 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 LEMD1Q68G75 181 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 CADM3Q8N126 398 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 MISP3Q96FF7 219 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 TXN2Q99757 166 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 AUNIPQ9H7T9 357 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 FKBP11Q9NYL4 201 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 PRNDQ9UKY0 176 aa11.82□□□□□ -0.52
CDC42BPB-205ENST00000559245 A0A0A6YYH2 397 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 A0A1B0GVY2 172 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 MEIS3P1A6NDR6 274 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 A6NJ64 397 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 DBX1A6NMT0 343 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 DNASE2O00115 360 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 PGLYRP1O75594 196 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 DFFBO76075 338 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 CD5P06127 495 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 HLA-DMBP28068 263 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 NEDD8Q15843 81 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 ST8SIA2Q92186 375 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms