RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TMEM56-RWDD3S4R434 201 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.33□□□□□ -0.12
CASC4-209ENST00000559222 NXPH3O95157 252 aa14.33□□□□□ -0.12
CASC4-209ENST00000559222 HSPE1P61604 102 aaKnown RBP14.33□□□□□ -0.12
CASC4-209ENST00000559222 ANKRD55Q3KP44 614 aa14.33□□□□□ -0.12
CASC4-209ENST00000559222 THOC7Q6I9Y2 204 aaKnown RBP14.33□□□□□ -0.12
CASC4-209ENST00000559222 HAPLN4Q86UW8 402 aa14.33□□□□□ -0.12
CASC4-209ENST00000559222 RANGRFQ9HD47 186 aaPredicted RBP14.33□□□□□ -0.12
CASC4-209ENST00000559222 FKBP11Q9NYL4 201 aa14.33□□□□□ -0.12
CASC4-209ENST00000559222 F11RQ9Y624 299 aaKnown RBP14.33□□□□□ -0.12
CASC4-209ENST00000559222 DUS4LO95620 317 aaKnown RBP14.32□□□□□ -0.12
CASC4-209ENST00000559222 EGFEM1PQ0D2K5 195 aa14.32□□□□□ -0.12
CASC4-209ENST00000559222 PPP1R1AQ13522 171 aa14.32□□□□□ -0.12
CASC4-209ENST00000559222 RBMS2Q15434 407 aaKnown RBP14.32□□□□□ -0.12
CASC4-209ENST00000559222 CLEC19AQ6UXS0 136 aa14.32□□□□□ -0.12
CASC4-209ENST00000559222 LYZL2Q7Z4W2 148 aa14.32□□□□□ -0.12
CASC4-209ENST00000559222 ZNF429Q86V71 674 aa14.32□□□□□ -0.12
CASC4-209ENST00000559222 OR2C3Q8N628 320 aa14.32□□□□□ -0.12
CASC4-209ENST00000559222 RRNAD1Q96FB5 475 aaKnown RBP14.32□□□□□ -0.12
CASC4-209ENST00000559222 SLC25A21Q9BQT8 299 aaPredicted RBP14.32□□□□□ -0.12
CASC4-209ENST00000559222 MCRIP2Q9BUT9 160 aaKnown RBP14.32□□□□□ -0.12
CASC4-209ENST00000559222 ZC4H2Q9NQZ6 224 aa14.32□□□□□ -0.12
CASC4-209ENST00000559222 CACNG5Q9UF02 275 aa14.32□□□□□ -0.12
CASC4-209ENST00000559222 NDUFB6O95139 128 aa14.31□□□□□ -0.12
CASC4-209ENST00000559222 DHFRP00374 187 aa14.31□□□□□ -0.12
CASC4-209ENST00000559222 EDN2P20800 178 aa14.31□□□□□ -0.12
CASC4-209ENST00000559222 SYNJ2BPP57105 145 aa14.31□□□□□ -0.12
CASC4-209ENST00000559222 KLF5Q13887 457 aaPredicted RBP14.31□□□□□ -0.12
CASC4-209ENST00000559222 SLC25A24Q6NUK1 477 aa14.31□□□□□ -0.12
CASC4-209ENST00000559222 WI2-2373I1.2A0A1W2PRP0 233 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 NAP1L6A6NFF2 107 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 ATG12O94817 140 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 HIST1H1BP16401 226 aaKnown RBP14.3□□□□□ -0.12
CASC4-209ENST00000559222 VAMP1P23763 118 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 NMSQ5H8A3 153 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 C9orf66Q5T8R8 295 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 ACSM6Q6P461 480 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 CENPSQ8N2Z9 138 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 ZNF502Q8TBZ5 544 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 PLEKHA3Q9HB20 300 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 KCNIP3Q9Y2W7 256 aa14.3□□□□□ -0.12
CASC4-209ENST00000559222 K7EIM0 57 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 IFNA17P01571 189 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 ZP3P21754 424 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 TMEM128Q5BJH2 165 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 IL34Q6ZMJ4 242 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 HSD17B13Q7Z5P4 300 aaPredicted RBP14.29□□□□□ -0.12
CASC4-209ENST00000559222 IL22RA2Q969J5 263 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 EEF1AKMT3Q96AZ1 226 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 BATF3Q9NR55 127 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 TBC1D24Q9ULP9 559 aa14.29□□□□□ -0.12
CASC4-209ENST00000559222 F8W735 103 aaPredicted RBP14.28□□□□□ -0.12
CASC4-209ENST00000559222 LYRM1O43325 122 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 SAP30O75446 220 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 OR2C1O95371 312 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 SFT2D2O95562 160 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 IGHV3-48P01763 117 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 ANXA7P20073 488 aaKnown RBP14.28□□□□□ -0.12
CASC4-209ENST00000559222 GPR183P32249 361 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 HOXA1P49639 335 aaPredicted RBP14.28□□□□□ -0.12
CASC4-209ENST00000559222 RPEL1Q2QD12 228 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 AARDQ4LEZ3 155 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 PDLIM3Q53GG5 364 aaPredicted RBP14.28□□□□□ -0.12
CASC4-209ENST00000559222 LINC00299Q6ZSB3 139 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 FAM219AQ8IW50 185 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 LGI3Q8N145 548 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 C7orf50Q9BRJ6 194 aaKnown RBP14.28□□□□□ -0.12
CASC4-209ENST00000559222 CCDC32Q9BV29 185 aa14.28□□□□□ -0.12
CASC4-209ENST00000559222 A0A0B4J2A0 478 aa14.27□□□□□ -0.13
CASC4-209ENST00000559222 K7EIL1 84 aa14.27□□□□□ -0.13
CASC4-209ENST00000559222 ARL3P36405 182 aa14.27□□□□□ -0.13
CASC4-209ENST00000559222 IFITM3Q01628 133 aa14.27□□□□□ -0.13
CASC4-209ENST00000559222 ZNF114Q8NC26 417 aa14.27□□□□□ -0.13
CASC4-209ENST00000559222 OR1P1Q8NH06 330 aa14.27□□□□□ -0.13
CASC4-209ENST00000559222 MISP3Q96FF7 219 aa14.27□□□□□ -0.13
CASC4-209ENST00000559222 SHPKQ9UHJ6 478 aa14.27□□□□□ -0.13
CASC4-209ENST00000559222 IGHV3-35A0A0C4DH35 117 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 RNASE2P10153 161 aaKnown RBP14.26□□□□□ -0.13
CASC4-209ENST00000559222 ANXA3P12429 323 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 ADAMTSL5Q6ZMM2 481 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 OR9G4Q8NGQ1 327 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 SCARB1Q8WTV0 552 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 S100ZQ8WXG8 99 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 ZNF414Q96IQ9 312 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 PRR25Q96S07 402 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 PDCD10Q9BUL8 212 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 GPR61Q9BZJ8 451 aa14.26□□□□□ -0.13
CASC4-209ENST00000559222 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.26□□□□□ -0.13
CASC4-209ENST00000559222 TRBV7-1A0A0A6YYK4 115 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 C9orf170A2RU37 121 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 CENPXA8MT69 81 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 I3L2K1 104 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 CLEC3BP05452 202 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 CSN3P07498 182 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 SULT1A3P0DMM9 295 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 SULT1A4P0DMN0 295 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 OR52B4Q8NGK2 314 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 VN1R17PQ8TDU5 208 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 CXorf58Q96LI9 332 aa14.25□□□□□ -0.13
CASC4-209ENST00000559222 C20orf85Q9H1P6 137 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms