RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 NOL3O60936 208 aaKnown RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 NDUFB8O95169 186 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 KRASP01116 189 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 IFNA6P05013 189 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 TBPP20226 339 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 ZP3P21754 424 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 G6PCP35575 357 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 PPP5CP53041 499 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 TAS2R19P59542 299 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 ERVK-16P61578 105 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 RND3P61587 244 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 ATP5G2Q06055 141 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 C15orf32Q32M92 178 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 DEFB121Q5J5C9 76 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 FAAP20Q6NZ36 180 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 IL34Q6ZMJ4 242 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 CADM3Q8N126 398 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 TMEM229BQ8NBD8 167 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 NECAP1Q8NC96 275 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 OR10W1Q8NGF6 305 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 C15orf40Q8WUR7 153 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 MRGPRFQ96AM1 343 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 DIRAS2Q96HU8 199 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 QTRT1Q9BXR0 403 aaKnown RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 C6orf62Q9GZU0 229 aaPredicted RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 NXF2Q9GZY0 626 aaKnown RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 RBM38Q9H0Z9 239 aaKnown RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 FAM212BQ9NTI7 297 aaPredicted RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 ZMAT5Q9UDW3 170 aaKnown RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 ZNF256Q9Y2P7 627 aaPredicted RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 NSG2Q9Y328 171 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 LSM4Q9Y4Z0 139 aaKnown RBP4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 DMRT1Q9Y5R6 373 aa4.59□□□□□ -1.67
CTDSPL2-204ENST00000558966 IGLV11-55A0A075B6I3 123 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 TEX50A0A1B0GTY4 177 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 DPPA5A6NC42 116 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 CTDSPLO15194 276 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 RAB3DO95716 219 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 PGAM2P15259 253 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 SPNP16150 400 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 PTBP1P26599 531 aaKnown RBP eCLIP4.58□□□□□ -1.684e-6■■■■■ 31.7
CTDSPL2-204ENST00000558966 SYNJ2BPP57105 145 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 TIRAPP58753 221 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 MRPS10P82664 201 aaKnown RBP4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 SSBP1Q04837 148 aaKnown RBP4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 STEAP1BQ6NZ63 245 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 OR9G4Q8NGQ1 327 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 SEC22AQ96IW7 307 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 C20orf173Q96LM9 149 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 SOSTQ9BQB4 213 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 COMMD5Q9GZQ3 224 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 DKK2Q9UBU2 259 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 S4R3C0 116 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 MFSD2BA6NFX1 497 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 C15orf61A6NNL5 157 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 PPP5D1E7EU14 171 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 H0Y980 276 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 GSTZ1O43708 216 aaPredicted RBP4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 IGLV1-51P01701 117 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 IGHV3-23P01764 117 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 HLA-AP01891 365 aaKnown RBP4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 TRAPPC2P0DI81 140 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 TRAPPC2BP0DI82 140 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 S100GP29377 79 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 TNFSF8P32971 234 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 PIGPP57054 158 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 WT1-ASQ06250 92 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 IL18Q14116 193 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 RPEL1Q2QD12 228 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 SCGB2B2Q4G0G5 96 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 THOC7Q6I9Y2 204 aaKnown RBP4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 OR4C16Q8NGL9 310 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 OR1L8Q8NGR8 309 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 OR13C8Q8NGS7 320 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 TERB2Q8NHR7 220 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 MCFD2Q8NI22 146 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 MARCH1Q8TCQ1 289 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 ZNF486Q96H40 463 aaPredicted RBP4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 OR4C12Q96R67 309 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 TP53RKQ96S44 253 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 B9D2Q9BPU9 175 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 SRSF8Q9BRL6 282 aaKnown RBP4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 NDUFA4L2Q9NRX3 87 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 TMEM14BQ9NUH8 114 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 OR51B2Q9Y5P1 312 aa4.58□□□□□ -1.68
CTDSPL2-204ENST00000558966 DHFRP00374 187 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 IGKV1-5P01602 117 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 SERPINE2P07093 398 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 CSN3P07498 182 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 P0C879 139 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 OR13C7P0DN81 318 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 DEFA4P12838 97 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 GP9P14770 177 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 HIST1H1BP16401 226 aaKnown RBP4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 MFAP2P55001 183 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 DCTN2Q13561 401 aaKnown RBP4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 MEF2DQ14814 521 aa4.57□□□□□ -1.68
CTDSPL2-204ENST00000558966 IZUMO4Q1ZYL8 232 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms