RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 ZFYVE26Q68DK2 2539 aa8.62□□□□□ -1.03
CUX1-217ENST00000558836 FLNCQ14315 2725 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 IGKV1OR2-108A0A075B7D4 117 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 APOA2P02652 100 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 IGHV1-8P0DP01 117 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 FABP9Q0Z7S8 132 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 FAM216AQ8WUB2 273 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 COMMD5Q9GZQ3 224 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 SLC25A17O43808 307 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 HNF1AP20823 631 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 COX7A1P24310 79 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 OPRK1P41145 380 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 PRCDQ00LT1 54 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 C4orf17Q53FE4 359 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 C19orf35Q6ZS72 473 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 OR5AN1Q8NGI8 311 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 NABP2Q9BQ15 211 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 LSM4Q9Y4Z0 139 aaKnown RBP8.61□□□□□ -1.03
CUX1-217ENST00000558836 UTP20O75691 2785 aaKnown RBP8.61□□□□□ -1.03
CUX1-217ENST00000558836 CNTFRP26992 372 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 DLX6P56179 175 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 LGALS4P56470 323 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 TMEM241Q24JQ0 296 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 TMEM155Q4W5P6 130 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 TGIF2LXQ8IUE1 241 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 OR10A7Q8NGE5 316 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 OR9G1Q8NH87 305 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 OR2T6Q8NHC8 308 aa8.61□□□□□ -1.03
CUX1-217ENST00000558836 NDUFB4O95168 129 aa8.6□□□□□ -1.03
CUX1-217ENST00000558836 TRGC2P03986 189 aa8.6□□□□□ -1.03
CUX1-217ENST00000558836 SNRPCP09234 159 aaKnown RBP8.6□□□□□ -1.03
CUX1-217ENST00000558836 RPL23P62829 140 aaKnown RBP8.6□□□□□ -1.03
CUX1-217ENST00000558836 RPL8P62917 257 aaKnown RBP8.6□□□□□ -1.03
CUX1-217ENST00000558836 EFNB3Q15768 340 aa8.6□□□□□ -1.03
CUX1-217ENST00000558836 POU2AF1Q16633 256 aa8.6□□□□□ -1.03
CUX1-217ENST00000558836 SPNS3Q6ZMD2 512 aa8.6□□□□□ -1.03
CUX1-217ENST00000558836 A0A087WWC5 75 aa8.6□□□□□ -1.03
CUX1-217ENST00000558836 ZNF672Q499Z4 452 aaPredicted RBP8.6□□□□□ -1.03
CUX1-217ENST00000558836 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
CUX1-217ENST00000558836 ZNF430Q9H8G1 570 aaPredicted RBP8.6□□□□□ -1.03
CUX1-217ENST00000558836 ACACBO00763 2458 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 C5orf52A6NGY3 159 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 MPDU1O75352 247 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 GNB1P62873 340 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 SSBP2P81877 361 aaPredicted RBP8.59□□□□□ -1.03
CUX1-217ENST00000558836 GAMTQ14353 236 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 FAM78BQ5VT40 261 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 C16orf82Q7Z2V1 217 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 ST6GALNAC3Q8NDV1 305 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 OR4P4Q8NGL7 312 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 OR4C13Q8NGP0 309 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 OSR1Q8TAX0 266 aaPredicted RBP8.59□□□□□ -1.03
CUX1-217ENST00000558836 NANPQ8TBE9 248 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 ST6GALNAC6Q969X2 333 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 ELOVL1Q9BW60 279 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 BET1LQ9NYM9 111 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 NAT8Q9UHE5 227 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 IGHV3-21A0A0B4J1V1 117 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 SEC14L6B5MCN3 397 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 FABP1P07148 127 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 RNASE2P10153 161 aaKnown RBP8.59□□□□□ -1.03
CUX1-217ENST00000558836 UCNP55089 124 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 WT1-ASQ06250 92 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 BSXQ3C1V8 233 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 MIR17HGQ75NE6 70 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 LHFPL4Q7Z7J7 247 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 NEIL1Q96FI4 390 aaPredicted RBP8.59□□□□□ -1.03
CUX1-217ENST00000558836 TMEM133Q9H2Q1 129 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 MANBALQ9NQG1 85 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 KAAG1Q9UBP8 84 aa8.59□□□□□ -1.03
CUX1-217ENST00000558836 A0A1W2PRD5 423 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 A0A1W2PRF3 423 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 A0A1W2PRM7 423 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 CGB1A6NKQ9 187 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 CLDN34H7C241 214 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 SOD3P08294 240 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 OR10J1P30954 320 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 RUSC1-AS1Q66K80 236 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 HCP5Q6MZN7 132 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 SSX8Q7RTT4 187 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 TMEM186Q96B77 213 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 NDUFA4L2Q9NRX3 87 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 ZNF257Q9Y2Q1 563 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 STAG3L2P0CL84 134 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 CHRNA7P36544 502 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 PNRC1Q12796 327 aaPredicted RBP8.58□□□□□ -1.04
CUX1-217ENST00000558836 ZNF841Q6ZN19 808 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 ZNF114Q8NC26 417 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 YTHDF2Q9Y5A9 579 aaKnown RBP8.58□□□□□ -1.04
CUX1-217ENST00000558836 CELSR2Q9HCU4 2923 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 CENPEQ02224 2701 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 CACNA1AO00555 2505 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 IGHV2-26A0A0B4J1V2 119 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 PPIAL4CA0A0B4J2A2 164 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 TMEM250H0YL14 139 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 IGLV2-23P01705 113 aa8.58□□□□□ -1.04
CUX1-217ENST00000558836 PPIAL4GP0DN37 164 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms