RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 PGAM2P15259 253 aa11.69□□□□□ -0.54
CSHL1-208ENST00000558609 GPR183P32249 361 aa11.69□□□□□ -0.54
CSHL1-208ENST00000558609 MFAP2P55001 183 aa11.69□□□□□ -0.54
CSHL1-208ENST00000558609 SSBP1Q04837 148 aaKnown RBP11.69□□□□□ -0.54
CSHL1-208ENST00000558609 ZNF846Q147U1 533 aa11.69□□□□□ -0.54
CSHL1-208ENST00000558609 PLET1Q6UQ28 207 aa11.69□□□□□ -0.54
CSHL1-208ENST00000558609 LINC00299Q6ZSB3 139 aa11.69□□□□□ -0.54
CSHL1-208ENST00000558609 H2BFWTQ7Z2G1 175 aa11.69□□□□□ -0.54
CSHL1-208ENST00000558609 OR1L6Q8NGR2 347 aa11.69□□□□□ -0.54
CSHL1-208ENST00000558609 NXF2Q9GZY0 626 aaKnown RBP11.69□□□□□ -0.54
CSHL1-208ENST00000558609 PIGPP57054 158 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 TAS2R19P59542 299 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 CD81P60033 236 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 MRPS10P82664 201 aaKnown RBP11.68□□□□□ -0.54
CSHL1-208ENST00000558609 UNQ9165/PRO28630Q6UXU0 137 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 UXS1Q8NBZ7 420 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 OR4D10Q8NGI6 311 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 TERB2Q8NHR7 220 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 CACNG8Q8WXS5 425 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 MRGPRFQ96AM1 343 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 NEURL2Q9BR09 285 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 ZNF436Q9C0F3 470 aaPredicted RBP11.68□□□□□ -0.54
CSHL1-208ENST00000558609 TUBA4BQ9H853 241 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 PALMDQ9NP74 551 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 SLC2A8Q9NY64 477 aa11.68□□□□□ -0.54
CSHL1-208ENST00000558609 C3orf84H3BNL1 204 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 TGOLN2O43493 480 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 RAB3DO95716 219 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 C8orf88P0DMB2 117 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 PI3P19957 117 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 ELLP55199 621 aaPredicted RBP11.67□□□□□ -0.54
CSHL1-208ENST00000558609 HAGHQ16775 308 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 TM4SF20Q53R12 229 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 SPANXN2Q5MJ10 180 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 ZNF57Q68EA5 555 aaPredicted RBP11.67□□□□□ -0.54
CSHL1-208ENST00000558609 STEAP1BQ6NZ63 245 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 LINC00322Q6ZN03 302 aaPredicted RBP11.67□□□□□ -0.54
CSHL1-208ENST00000558609 OR1P1Q8NH06 330 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 ZFAND1Q8TCF1 268 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 SCARB1Q8WTV0 552 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 MARC2Q969Z3 335 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 WDR89Q96FK6 387 aaPredicted RBP11.67□□□□□ -0.54
CSHL1-208ENST00000558609 BSCL2Q96G97 398 aaPredicted RBP11.67□□□□□ -0.54
CSHL1-208ENST00000558609 WDR12Q9GZL7 423 aaKnown RBP11.67□□□□□ -0.54
CSHL1-208ENST00000558609 C21orf62Q9NYP8 219 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 RABL2AQ9UBK7 228 aaPredicted RBP11.67□□□□□ -0.54
CSHL1-208ENST00000558609 RABL2BQ9UNT1 228 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 UFC1Q9Y3C8 167 aa11.67□□□□□ -0.54
CSHL1-208ENST00000558609 OR2T8A6NH00 312 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 K7EIM0 57 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 CD7P09564 240 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 HSPE1P61604 102 aaKnown RBP11.66□□□□□ -0.54
CSHL1-208ENST00000558609 PRCDQ00LT1 54 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 GUCA2BQ16661 112 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 SPSB3Q6PJ21 355 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 TMEM61Q8N0U2 210 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 OR2C3Q8N628 320 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 SMIM4Q8WVI0 70 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 DIRAS2Q96HU8 199 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 MRPL27Q9P0M9 148 aaKnown RBP11.66□□□□□ -0.54
CSHL1-208ENST00000558609 MLXQ9UH92 298 aa11.66□□□□□ -0.54
CSHL1-208ENST00000558609 IGHV3-35A0A0C4DH35 117 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 C3orf85A0A1B0GTC6 90 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 F8W735 103 aaPredicted RBP11.65□□□□□ -0.54
CSHL1-208ENST00000558609 CTDSPLO15194 276 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 P0C879 139 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 TNFSF8P32971 234 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 PPP5CP53041 499 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 MEF2DQ14814 521 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 SCGB2B2Q4G0G5 96 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 CCDC71LQ8N9Z2 235 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 ZNF114Q8NC26 417 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 OR13C8Q8NGS7 320 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 MUC7Q8TAX7 377 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 CITED4Q96RK1 184 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 SPATA25Q9BR10 227 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 PLEKHA3Q9HB20 300 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 COPZ2Q9P299 210 aa11.65□□□□□ -0.54
CSHL1-208ENST00000558609 TENM2Q9NT68 2774 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 IGHV3-21A0A0B4J1V1 117 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 FABP12A6NFH5 140 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 B3GALNT1O75752 331 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 ATG12O94817 140 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 IGKV1-5P01602 117 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 CTSDP07339 412 aaPredicted RBP11.64□□□□□ -0.55
CSHL1-208ENST00000558609 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 MARCH1Q8TCQ1 289 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 TMEM190Q8WZ59 177 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 CHRDL1Q9BU40 450 aa11.64□□□□□ -0.55
CSHL1-208ENST00000558609 GAR1Q9NY12 217 aaKnown RBP11.64□□□□□ -0.55
CSHL1-208ENST00000558609 A0A0B4J293 547 aa11.63□□□□□ -0.55
CSHL1-208ENST00000558609 OR11H12B2RN74 326 aa11.63□□□□□ -0.55
CSHL1-208ENST00000558609 I3L2K1 104 aa11.63□□□□□ -0.55
CSHL1-208ENST00000558609 NDUFA4O00483 81 aa11.63□□□□□ -0.55
CSHL1-208ENST00000558609 UCP1P25874 307 aa11.63□□□□□ -0.55
CSHL1-208ENST00000558609 FCGR2BP31994 310 aaPredicted RBP11.63□□□□□ -0.55
CSHL1-208ENST00000558609 ADMP35318 185 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms