RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 HLA-DRB3P79483 266 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 ERCC8Q13216 396 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 SURF2Q15527 256 aaPredicted RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 GUCA2BQ16661 112 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 ORMDL2Q53FV1 153 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 KLHL12Q53G59 568 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 CYB5R2Q6BCY4 276 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 LCN8Q6JVE9 175 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 RPL13AP3Q6NVV1 102 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 TMPPEQ6ZT21 453 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 SLC16A13Q7RTY0 426 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF567Q8N184 647 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 LINC00337Q8N6G1 96 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 OR52L1Q8NGH7 329 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 FAM57AQ8TBR7 257 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 TWIST2Q8WVJ9 160 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 CNBD2Q96M20 576 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 YPEL4Q96NS1 127 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 TMEM70Q9BUB7 260 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 RNASE7Q9H1E1 156 aaKnown RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF702PQ9H963 129 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 LYRM2Q9NU23 88 aaPredicted RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 UQCC1Q9NVA1 299 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 DHRS4-AS1Q9P1J3 65 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 RSL24D1Q9UHA3 163 aaKnown RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 LINC00527Q9UJ94 153 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 PRNDQ9UKY0 176 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 PKIGQ9Y2B9 76 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 COQ4Q9Y3A0 265 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 F11RQ9Y624 299 aaKnown RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 USF3Q68DE3 2245 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 TRAV8-1A0A0A6YYK1 113 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 IGHV2-26A0A0B4J1V2 119 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 IGHV3-74A0A0B4J1X5 117 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 IGKV1-8A0A0C4DH67 115 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 PVALEFA0A1B0GWK0 134 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 hADV38S2A0JD32 116 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 KLLNB2CW77 178 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 F5H5P2 479 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 M0R1X1 148 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 BET1O15155 118 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 GYG2O15488 501 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 ANGPTL7O43827 346 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 MFSD11O43934 449 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 CCDC22O60826 627 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 IGHG2P01859 326 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 SERPINE1P05121 402 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 SCGB1C2P0DMR2 95 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 FGF6P10767 208 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 CTLA4P16410 223 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 CCR6P51684 374 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 MP68P56378 58 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 MEF2CQ06413 473 aaPredicted RBP2.99□□□□□ -1.93
LRRC28-205ENST00000558248 PNOCQ13519 176 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 MESTQ5EB52 335 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 TCTEX1D4Q5JR98 221 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 ATAD3CQ5T2N8 411 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 C1orf194Q5T5A4 169 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 FAM222AQ5U5X8 452 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 SAMD13Q5VXD3 122 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 NXNL2Q5VZ03 156 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 NANOGP8Q6NSW7 305 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 ZFP1Q6P2D0 407 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 Q6ZRU5 148 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 RNF165Q6ZSG1 346 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 GOLT1AQ6ZVE7 132 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 VN1R4Q7Z5H5 301 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 MDP1Q86V88 176 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 KRTAP7-1Q8IUC3 87 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 FAM24BQ8N5W8 94 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 DRAM1Q8N682 238 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 DEFB125Q8N687 156 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 ZIC4Q8N9L1 334 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 OR2M7Q8NG81 312 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 OR4M1Q8NGD0 313 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 SCGB1C1Q8TD33 95 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 PYURFQ96I23 114 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 LINC00477Q96M19 166 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 LINC01587Q99440 93 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 HSD17B10Q99714 261 aaKnown RBP2.99□□□□□ -1.93
LRRC28-205ENST00000558248 NRIP2Q9BQI9 281 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 NANOGQ9H9S0 305 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 PDFQ9HBH1 243 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 NOX3Q9HBY0 568 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 FAM60AQ9NP50 221 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 C14orf105Q9NVL8 296 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 RASL12Q9NYN1 266 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 RBM12B-AS1Q9P1G2 102 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 CACNG5Q9UF02 275 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 SSR3Q9UNL2 185 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 NEU3Q9UQ49 428 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 POMPQ9Y244 141 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 WASHC3Q9Y3C0 194 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 FIS1Q9Y3D6 152 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 MGAM2Q2M2H8 2515 aa2.99□□□□□ -1.93
LRRC28-205ENST00000558248 A0A0J9YWU9 116 aa2.98□□□□□ -1.93
LRRC28-205ENST00000558248 A0A1W2PRE2 83 aa2.98□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF98A6NK75 572 aa2.98□□□□□ -1.93
LRRC28-205ENST00000558248 RFPL4AA6NLU0 287 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms