RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 EBI3Q14213 229 aa16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 LRRC75BQ2VPJ9 315 aa16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 CITED4Q96RK1 184 aa16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 WDR61Q9GZS3 305 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 FBXO7Q9Y3I1 522 aa16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 NAV3Q8IVL0 2385 aa16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 SMCO3A2RU48 225 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 FGF16O43320 207 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 FAM106CPP0CH98 169 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 BRS3P32247 399 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 SULT1A2P50226 295 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 C5orf64Q2M2E5 130 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 BSXQ3C1V8 233 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 A0A1W2PN81 502 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 IGLC7A0M8Q6 106 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 CHRNA7P36544 502 aa16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 ERHP84090 104 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 CIARTQ8N365 385 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 SRSF12Q8WXF0 261 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-205ENST00000558036 CNIH1O95406 144 aa16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 ATP6V1FQ16864 119 aa16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 COMMD7Q86VX2 200 aa16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 TAF15Q92804 592 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 FAM103A1Q9BTL3 118 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 ABCA1O95477 2261 aa16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 CR1P17927 2039 aa16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 TEX22C9J3V5 150 aa16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 MAS1LP35410 378 aa16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 VWC2Q2TAL6 325 aa16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 GNPNAT1Q96EK6 184 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-205ENST00000558036 FGF7P21781 194 aa16.23■□□□□ 0.19
SNRPA1-205ENST00000558036 MLANAQ16655 118 aa16.23■□□□□ 0.19
SNRPA1-205ENST00000558036 C2orf83Q53S99 150 aa16.23■□□□□ 0.19
SNRPA1-205ENST00000558036 ARSJQ5FYB0 599 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-205ENST00000558036 SSMEM1Q8WWF3 244 aa16.23■□□□□ 0.19
SNRPA1-205ENST00000558036 FAM96BQ9Y3D0 163 aa16.23■□□□□ 0.19
SNRPA1-205ENST00000558036 INS-IGF2F8WCM5 200 aa16.22■□□□□ 0.19
SNRPA1-205ENST00000558036 PRH1P02810 166 aa16.22■□□□□ 0.19
SNRPA1-205ENST00000558036 TMEM219Q86XT9 240 aa16.22■□□□□ 0.19
SNRPA1-205ENST00000558036 C22orf15Q8WYQ4 148 aa16.22■□□□□ 0.19
SNRPA1-205ENST00000558036 P2RX4Q99571 388 aa16.22■□□□□ 0.19
SNRPA1-205ENST00000558036 PXDC1Q5TGL8 231 aa16.22■□□□□ 0.19
SNRPA1-205ENST00000558036 FXYD3Q14802 87 aa16.21■□□□□ 0.19
SNRPA1-205ENST00000558036 BTNL8Q6UX41 500 aa16.21■□□□□ 0.19
SNRPA1-205ENST00000558036 Q6ZRG5 221 aa16.21■□□□□ 0.19
SNRPA1-205ENST00000558036 PIFOQ8TCI5 191 aa16.21■□□□□ 0.19
SNRPA1-205ENST00000558036 MXRA5Q9NR99 2828 aa16.21■□□□□ 0.19
SNRPA1-205ENST00000558036 TREML4Q6UXN2 200 aa16.21■□□□□ 0.18
SNRPA1-205ENST00000558036 Q8N9W7 124 aa16.21■□□□□ 0.18
SNRPA1-205ENST00000558036 HRH4Q9H3N8 390 aa16.21■□□□□ 0.18
SNRPA1-205ENST00000558036 VSIRQ9H7M9 311 aa16.21■□□□□ 0.18
SNRPA1-205ENST00000558036 CSPG4Q6UVK1 2322 aa16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 FLNAP21333 2647 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 SMAD7O15105 426 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 IGHV3-48P01763 117 aa16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 NDPQ00604 133 aa16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 ZNF616Q08AN1 781 aa16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 FAM213BQ8TBF2 198 aa16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 LRRC20Q8TCA0 184 aa16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 SSX3Q99909 188 aa16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 NPCDR1Q9BY65 106 aa16.2■□□□□ 0.18
SNRPA1-205ENST00000558036 MDFIC2A0A1B0GVS7 189 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 SH2D7A6NKC9 451 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 MDKP21741 143 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 CAMLGP49069 296 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 MFAP2P55001 183 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 ELLP55199 621 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 CX3CL1P78423 397 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 DLK1P80370 383 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 ABHD5Q8WTS1 349 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 PARD6GQ9BYG4 376 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 WDR83OSQ9Y284 106 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 J3QLI3 93 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 BCL6BQ8N143 479 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 GGACTQ9BVM4 153 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 MEGF9Q9H1U4 602 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 PFDN2Q9UHV9 154 aa16.19■□□□□ 0.18
SNRPA1-205ENST00000558036 SCAF4O95104 1147 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-205ENST00000558036 AKR1C1Q04828 323 aa16.18■□□□□ 0.18
SNRPA1-205ENST00000558036 SAT2Q96F10 170 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-205ENST00000558036 A0A1B0GV50 99 aa16.18■□□□□ 0.18
SNRPA1-205ENST00000558036 AKR1C8PQ5T2L2 129 aa16.18■□□□□ 0.18
SNRPA1-205ENST00000558036 ZNF562Q6V9R5 426 aa16.18■□□□□ 0.18
SNRPA1-205ENST00000558036 FBP1P09467 338 aa16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 SUB1P53999 127 aaKnown RBP eCLIP16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 ATP5IP56385 69 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 LY6EQ16553 131 aa16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 OR2T6Q8NHC8 308 aa16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 ARPC1AQ92747 370 aa16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 HSPB9Q9BQS6 159 aa16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 PSMG3Q9BT73 122 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 FNDC4Q9H6D8 234 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 NPVFQ9HCQ7 196 aa16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 C1RLQ9NZP8 487 aa16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 DMRT1Q9Y5R6 373 aa16.17■□□□□ 0.18
SNRPA1-205ENST00000558036 UMAD1C9J7I0 102 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 AGPAT2O15120 278 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 EIF3GO75821 320 aaKnown RBP eCLIP16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 OPRK1P41145 380 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 GAMTQ14353 236 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms