RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 VSTM2AQ8TAG5 236 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 SCGB1C1Q8TD33 95 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 PINX1Q96BK5 328 aaKnown RBP5.89□□□□□ -1.47
SPG11-204ENST00000557866 GNPNAT1Q96EK6 184 aaPredicted RBP5.89□□□□□ -1.47
SPG11-204ENST00000557866 LINC00052Q96N35 136 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 FAM210AQ96ND0 272 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 SCRT1Q9BWW7 348 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 HINT2Q9BX68 163 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 HIPK2Q9H2X6 1198 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 HRH4Q9H3N8 390 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 VSIRQ9H7M9 311 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 PLEKHA3Q9HB20 300 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 UQCC1Q9NVA1 299 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 FKBP11Q9NYL4 201 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 SIGLEC9Q9Y336 463 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 FBXO7Q9Y3I1 522 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 HILPDAQ9Y5L2 63 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 MINOS1-NBL1R4GNA1 71 aa5.89□□□□□ -1.47
SPG11-204ENST00000557866 KMT2BQ9UMN6 2715 aaPredicted RBP5.89□□□□□ -1.47
SPG11-204ENST00000557866 RAB19A4D1S5 217 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 UMAD1C9J7I0 102 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 INS-IGF2F8WCM5 200 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 TRIM77I1YAP6 450 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 FCN1O00602 326 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 PRH1P02810 166 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 FGF7P21781 194 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 CD24P25063 80 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 CAMLGP49069 296 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 UBE2E1P51965 193 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 F2RL1P55085 397 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 RPP30P78346 268 aaKnown RBP5.88□□□□□ -1.47
SPG11-204ENST00000557866 WT1-ASQ06250 92 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 HNF4GQ14541 408 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 SLC25A24Q6NUK1 477 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 SPSB3Q6PJ21 355 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 Q8N6K4 173 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 BPIFCQ8NFQ6 507 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 FAM213BQ8TBF2 198 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 ANAPC16Q96DE5 110 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 CLCC1Q96S66 551 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 RNF5Q99942 180 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 PSMG3Q9BT73 122 aaPredicted RBP5.88□□□□□ -1.47
SPG11-204ENST00000557866 GGACTQ9BVM4 153 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 FBXL15Q9H469 300 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 ENY2Q9NPA8 101 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 RPRMQ9NS64 109 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 WDR83OSQ9Y284 106 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 SVEP1Q4LDE5 3571 aa5.88□□□□□ -1.47
SPG11-204ENST00000557866 UTP20O75691 2785 aaKnown RBP5.88□□□□□ -1.47
SPG11-204ENST00000557866 FAM208BQ5VWN6 2430 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 LRRK2Q5S007 2527 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 NBPF19A0A087WUL8 3843 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 CENPVL3A0A0U1RRI6 287 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 IGLC7A0M8Q6 106 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 C9JQL5 133 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 J3QKU1 62 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 AGPAT2O15120 278 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 EIF3GO75821 320 aaKnown RBP eCLIP5.87□□□□□ -1.47
SPG11-204ENST00000557866 IGKV1D-33P01593 117 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 IGKV1-33P01594 117 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 IFNA4P05014 189 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 SNRNP70P08621 437 aaKnown RBP5.87□□□□□ -1.47
SPG11-204ENST00000557866 ATF4P18848 351 aaPredicted RBP5.87□□□□□ -1.47
SPG11-204ENST00000557866 CEACAM3P40198 252 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 COMPP49747 757 aaPredicted RBP5.87□□□□□ -1.47
SPG11-204ENST00000557866 DSCR9P59020 149 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 RAB11AP62491 216 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 CCL20P78556 96 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 DLK1P80370 383 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 ZNF726P1Q15940 193 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 SSX2Q16385 188 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 CLEC12BQ2HXU8 276 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 C2orf83Q53S99 150 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 FAM120AOSQ5T036 256 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 AKR1C8PQ5T2L2 129 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 HIST2H2BCQ6DN03 193 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 ACSM6Q6P461 480 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 IL34Q6ZMJ4 242 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 NPBQ8NG41 125 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 MGST2Q99735 147 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 COMMD5Q9GZQ3 224 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 METTL1Q9UBP6 276 aaKnown RBP5.87□□□□□ -1.47
SPG11-204ENST00000557866 TBL2Q9Y4P3 447 aaKnown RBP5.87□□□□□ -1.47
SPG11-204ENST00000557866 LSM4Q9Y4Z0 139 aaKnown RBP5.87□□□□□ -1.47
SPG11-204ENST00000557866 TIMM9Q9Y5J7 89 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 SPG11Q96JI7 2443 aa5.87□□□□□ -1.47
SPG11-204ENST00000557866 TACC2O95359 2948 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 CHD6Q8TD26 2715 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 IGHV3OR16-10A0A075B7F0 116 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 A0A1B0GV50 99 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 A0A1W2PN81 502 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 OOSP1A8MZH6 123 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 TEX22C9J3V5 150 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 NPFFO15130 113 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 SCAF4O95104 1147 aaKnown RBP5.86□□□□□ -1.47
SPG11-204ENST00000557866 NDUFA3O95167 84 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 MOSP00540 346 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 ZP3P21754 424 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 CHRNA7P36544 502 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 219.6 ms