RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 H3BUA1 57 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 HLA-AP01891 365 aaKnown RBP12.78□□□□□ -0.36
NEK9-211ENST00000557673 FRMD6-AS1P0C7T7 363 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 ANXA7P20073 488 aaKnown RBP12.78□□□□□ -0.36
NEK9-211ENST00000557673 ANKRD55Q3KP44 614 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 FAM219AQ8IW50 185 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 LGI3Q8N145 548 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 OR1L8Q8NGR8 309 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 OR5B3Q8NH48 314 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 DCUN1D4Q92564 292 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 RRNAD1Q96FB5 475 aaKnown RBP12.78□□□□□ -0.36
NEK9-211ENST00000557673 MS4A10Q96PG2 267 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 OR51B2Q9Y5P1 312 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 A0A0B4J2A0 478 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 NPIPB5A8MRT5 1133 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 OR4E1P0C645 316 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 AREGP15514 252 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 TPPP2P59282 170 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 DHRS2Q13268 280 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 NMSQ5H8A3 153 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 LRTM2Q8N967 370 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 OR5T1Q8NG75 326 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 OR4A16Q8NH70 328 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 ENKURQ8TC29 256 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 LSM10Q969L4 123 aaKnown RBP12.77□□□□□ -0.37
NEK9-211ENST00000557673 SRSF8Q9BRL6 282 aaKnown RBP12.77□□□□□ -0.37
NEK9-211ENST00000557673 NDUFA4L2Q9NRX3 87 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 COA4Q9NYJ1 87 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 FKBP11Q9NYL4 201 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 SHPKQ9UHJ6 478 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 ZNF257Q9Y2Q1 563 aa12.77□□□□□ -0.37
NEK9-211ENST00000557673 TRAV6A0A075B6T7 132 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 A0A0B4J293 547 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 TEX50A0A1B0GTY4 177 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 DUXBA0A1W2PPF3 345 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 C9orf170A2RU37 121 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 BRI3O95415 125 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 IGHV3-11P01762 117 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 LGALS1P09382 135 aaKnown RBP12.76□□□□□ -0.37
NEK9-211ENST00000557673 GP9P14770 177 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 SPNP16150 400 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 DEFA1P59665 94 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 DEFA3P59666 94 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 LYG2Q86SG7 212 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 TTC9CQ8N5M4 171 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 SLA2Q9H6Q3 261 aa12.76□□□□□ -0.37
NEK9-211ENST00000557673 IGHV4OR15-8A0A075B7B6 117 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 A0A087WW49 117 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 PIGBOS1A0A0B4J2F0 54 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 LINC01619G3V211 115 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 TRGV3P03979 118 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 TRAPPC2P0DI81 140 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 TRAPPC2BP0DI82 140 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 MECP2P51608 486 aaKnown RBP12.75□□□□□ -0.37
NEK9-211ENST00000557673 SLURP1P55000 103 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 AARDQ4LEZ3 155 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 Q6ZRM9 215 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 C19orf35Q6ZS72 473 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 LYZL2Q7Z4W2 148 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 OR10W1Q8NGF6 305 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 CACNG5Q9UF02 275 aa12.75□□□□□ -0.37
NEK9-211ENST00000557673 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 RBMXL2O75526 392 aaKnown RBP12.74□□□□□ -0.37
NEK9-211ENST00000557673 REG1AP05451 166 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 CRYGCP07315 174 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 CTRB1P17538 263 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 PSMB6P28072 239 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 PRCDQ00LT1 54 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 WT1-ASQ06250 92 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 C4orf46Q504U0 113 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 HSD17B13Q7Z5P4 300 aaPredicted RBP12.74□□□□□ -0.37
NEK9-211ENST00000557673 NRARPQ7Z6K4 114 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
NEK9-211ENST00000557673 GPR146Q96CH1 333 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 HINT2Q9BX68 163 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 ZNF355PQ9NSJ1 428 aa12.74□□□□□ -0.37
NEK9-211ENST00000557673 GAR1Q9NY12 217 aaKnown RBP12.74□□□□□ -0.37
NEK9-211ENST00000557673 HUWE1Q7Z6Z7 4374 aaKnown RBP12.73□□□□□ -0.37
NEK9-211ENST00000557673 PRH1P02810 166 aa12.73□□□□□ -0.37
NEK9-211ENST00000557673 H2AFB2P0C5Z0 115 aa12.73□□□□□ -0.37
NEK9-211ENST00000557673 HSPE1P61604 102 aaKnown RBP12.73□□□□□ -0.37
NEK9-211ENST00000557673 DEFA5Q01523 94 aa12.73□□□□□ -0.37
NEK9-211ENST00000557673 ACSM6Q6P461 480 aa12.73□□□□□ -0.37
NEK9-211ENST00000557673 DUSP18Q8NEJ0 188 aa12.73□□□□□ -0.37
NEK9-211ENST00000557673 OR52B4Q8NGK2 314 aa12.73□□□□□ -0.37
NEK9-211ENST00000557673 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
NEK9-211ENST00000557673 TRBV9A0A0B4J1U6 114 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 SULT1A3P0DMM9 295 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 SULT1A4P0DMN0 295 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 OR13C7P0DN81 318 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 KLK9Q2XQG4 91 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 COQ8AQ8NI60 647 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 PDCD10Q9BUL8 212 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 ELOVL1Q9BW60 279 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 PLEKHA3Q9HB20 300 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 KLK9Q9UKQ9 250 aa12.72□□□□□ -0.37
NEK9-211ENST00000557673 SACSQ9NZJ4 4579 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms