RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 LPAL2Q16609 132 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 MRPL54Q6P161 138 aaKnown RBP9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 ADTRPQ96IZ2 230 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 C19orf24Q9BVV8 132 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 SERTAD4Q9NUC0 356 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 PRR14LQ5THK1 2151 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 FRYQ5TBA9 3013 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 A0A1W2PRE2 83 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 AHRRA9YTQ3 701 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 SAA2P0DJI9 122 aaPredicted RBP9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 MGST1P10620 155 aaKnown RBP9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 CHRNB4P30926 498 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 TFPI2P48307 235 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 PPOXP50336 477 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 C19orf35Q6ZS72 473 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNRF1Q8ND25 227 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 LEAP2Q969E1 77 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNF503Q96F45 646 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 TXN2Q99757 166 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 SLC35D1Q9NTN3 355 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 CDC42EP3Q9UKI2 254 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 IGHV3OR15-7A0A075B7D8 119 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 LNP1A1A4G5 178 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 IZUMO1RA6ND01 250 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 GGTLC3B5MD39 225 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 J3QR06 171 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 IGLV2-8P01709 118 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 APCSP02743 223 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNF883P0CG24 379 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 IGLC2P0DOY2 106 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 IGLC3P0DOY3 106 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 MMDQ15546 238 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 POU2AF1Q16633 256 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 CT45A1Q5HYN5 189 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 PNKDQ8N490 385 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 C11orf42Q8N5U0 333 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 GCSAMQ8N6F7 178 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 KLHDC1Q8N7A1 406 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 CT45A3Q8NHU0 189 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 BORCS7Q96B45 105 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNF331Q9NQX6 463 aaPredicted RBP9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 KNTC1P50748 2209 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 IGHV2OR16-5A0A0B4J2B6 119 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 DPRXA6NFQ7 191 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 C3orf79P0CE67 100 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 MYOD1P15172 320 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 HNRNPA3P51991 378 aaKnown RBP9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 GUSBP1Q15486 140 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 Q6ZN92 141 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 NIT1Q86X76 327 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 SIAH2O43255 324 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 HYPMO75409 117 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 USF1P22415 310 aaPredicted RBP9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 CFHR2P36980 270 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 PRCDQ00LT1 54 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNF439Q8NDP4 499 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 FAM122AQ96E09 287 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 IGF2BP2-AS1Q96M15 143 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 COMMD5Q9GZQ3 224 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNF257Q9Y2Q1 563 aa9.68□□□□□ -0.86
VIPAS39-211ENST00000557658 IGLV1-44P01699 117 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 C8orf88P0DMB2 117 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 CGB3P0DN86 165 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 CGB7P0DN87 165 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 KIR2DL2P43627 348 aaPredicted RBP9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 ATP5IP56385 69 aaPredicted RBP9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 UTF1Q5T230 341 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 VWA1Q6PCB0 445 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 LYG1Q8N1E2 194 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 NCOR1P1Q9H4R4 102 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 MRPL27Q9P0M9 148 aaKnown RBP9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 IGKV1OR2-108A0A075B7D4 117 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 IGHV1-18A0A0C4DH31 117 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 NTF3P20783 257 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 GATA2P23769 480 aaPredicted RBP9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 C17orf58Q2M2W7 97 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 DNAJC4Q9NNZ3 241 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 LAMTOR2Q9Y2Q5 125 aa9.67□□□□□ -0.86
VIPAS39-211ENST00000557658 KBTBD11-OT1A0A1B0GTJ5 212 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 UPK2O00526 184 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 C2orf83Q53S99 150 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 RASL11AQ6T310 242 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 MOB3BQ86TA1 216 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 C1orf210Q8IVY1 113 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 FAM19A2Q8N3H0 131 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 SLC25A33Q9BSK2 321 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 MRPL32Q9BYC8 188 aaKnown RBP9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 DSCAML1Q8TD84 2053 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 SELENOVP59797 346 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 ATP1A1-AS1Q5TC04 95 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 STUMQ69YW2 141 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 MOGAT3Q86VF5 341 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 STPG4Q8N801 248 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 WIPF2Q8TF74 440 aaPredicted RBP9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 WNT10AQ9GZT5 417 aa9.66□□□□□ -0.86
VIPAS39-211ENST00000557658 TNCP24821 2201 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms