RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 OPN1MWP04001 364 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 IFNA4P05014 189 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 OPN1MW2P0DN77 364 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 OPN1MW3P0DN78 364 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 NPY1RP25929 384 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 S100A11P31949 105 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 ARSJQ5FYB0 599 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-227ENST00000557599 ZNF562Q6V9R5 426 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 Q6YL49 198 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 TMEM219Q86XT9 240 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 BCL6BQ8N143 479 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-227ENST00000557599 LILRB2Q8N423 598 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 TMEM86BQ8N661 226 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 Q8N9W7 124 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 SLC24A4Q8NFF2 622 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 OR11H4Q8NGC9 324 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 OR1S2Q8NGQ3 325 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 SRSF12Q8WXF0 261 aaKnown RBP8.38□□□□□ -1.07
PRKCH-227ENST00000557599 ARPC1AQ92747 370 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 PRDM13Q9H4Q3 707 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 NDUFA4L2Q9NRX3 87 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 VWFP04275 2813 aa8.38□□□□□ -1.07
PRKCH-227ENST00000557599 FAM24AA6NFZ4 105 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 G3V3Q6 166 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 H3BP45 60 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 RNASE1P07998 156 aaKnown RBP8.37□□□□□ -1.07
PRKCH-227ENST00000557599 OR13C7P0DN81 318 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 IER3P46695 156 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 SULT1A1P50225 295 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 CX3CL1P78423 397 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 EWSR1Q01844 656 aaKnown RBP eCLIP8.37□□□□□ -1.07
PRKCH-227ENST00000557599 TMEM267Q0VDI3 215 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-227ENST00000557599 C9orf152Q5JTZ5 239 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 SLC25A24Q6NUK1 477 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 TMUB2Q71RG4 321 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 C9orf62Q8N4C0 152 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 KCNRGQ8N5I3 272 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 TMEM252Q8N6L7 170 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 C3orf56Q8N813 242 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 C5orf56Q8N8D9 126 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 OR10P1Q8NGE3 313 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 OR1L6Q8NGR2 347 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
PRKCH-227ENST00000557599 TMEM68Q96MH6 324 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 ARPC5LQ9BPX5 153 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 VPREB3Q9UKI3 123 aa8.37□□□□□ -1.07
PRKCH-227ENST00000557599 MDFIC2A0A1B0GVS7 189 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 DNAJC9-AS1A6NH13 148 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 INS-IGF2F8WCM5 200 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 CORTO00230 105 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 BCL2L11O43521 198 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 IFNA5P01569 189 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 IGHV4-59P01825 116 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 DEFA4P12838 97 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 VDAC2P45880 294 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-227ENST00000557599 PJVKQ0ZLH3 352 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 ZNF266Q14584 549 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 ATP6V1FQ16864 119 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 C10orf55Q5SWW7 151 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 OR8G2PQ6IF36 304 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 ETV3LQ6ZN32 361 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 SIGLECL1Q8N7X8 197 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 NPFFR1Q9GZQ6 430 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 PARP11Q9NR21 331 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 PLSCR3Q9NRY6 295 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 PLXNB1O43157 2135 aa8.36□□□□□ -1.07
PRKCH-227ENST00000557599 TET2Q6N021 2002 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-227ENST00000557599 RPS10-NUDT3A0A1W2PQS6 291 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 RNF222A6NCQ9 220 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 MSGN1A6NI15 193 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 CST7O76096 145 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 METTL15P1P0C7V9 234 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 MYOD1P15172 320 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 SLC38A11Q08AI6 406 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 FOXL1Q12952 345 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 OPCMLQ14982 345 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 ETFRF1Q6IPR1 90 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 SHISA2Q6UWI4 295 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 TMEM14EPQ6UXP3 125 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 SLC35E3Q7Z769 313 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 SLC51BQ86UW2 128 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 TMEM217Q8N7C4 229 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 RBMXL1Q96E39 390 aaKnown RBP8.35□□□□□ -1.07
PRKCH-227ENST00000557599 ZNF471Q9BX82 626 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-227ENST00000557599 PRSS22Q9GZN4 317 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 TNFRSF19Q9NS68 423 aa8.35□□□□□ -1.07
PRKCH-227ENST00000557599 SOX21Q9Y651 276 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-227ENST00000557599 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
PRKCH-227ENST00000557599 IGSF23A1L1A6 192 aa8.34□□□□□ -1.07
PRKCH-227ENST00000557599 FCN1O00602 326 aa8.34□□□□□ -1.07
PRKCH-227ENST00000557599 HOXA3O43365 443 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-227ENST00000557599 SCGB2A1O75556 95 aa8.34□□□□□ -1.07
PRKCH-227ENST00000557599 JTBO76095 146 aa8.34□□□□□ -1.07
PRKCH-227ENST00000557599 CRYBA1P05813 215 aa8.34□□□□□ -1.07
PRKCH-227ENST00000557599 TPT1P13693 172 aaKnown RBP8.34□□□□□ -1.07
PRKCH-227ENST00000557599 CXCL2P19875 107 aa8.34□□□□□ -1.07
PRKCH-227ENST00000557599 PAX9P55771 341 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms