RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 SSX5O60225 188 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 CD5P06127 495 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 GIG44P09565 113 aaPredicted RBP13.27□□□□□ -0.29
ABCD4-228ENST00000557588 PAFAH1B2P68402 229 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 TMEM41BQ5BJD5 291 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 DMBX1Q8NFW5 382 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 OR1L8Q8NGR8 309 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 NDUFA4L2Q9NRX3 87 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 COMMD9Q9P000 198 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 TRAV2A0A0B4J234 112 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 GNG2P59768 71 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 DEFB131AP59861 70 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 LGALS9BQ3B8N2 356 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 LEMD1Q68G75 181 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 TCF24Q7RTU0 167 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 MGLLQ99685 303 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 DUSP21Q9H596 190 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 X6R8D5 127 aa13.26□□□□□ -0.29
ABCD4-228ENST00000557588 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
ABCD4-228ENST00000557588 TRAV14DV4A0A0A6YYC5 116 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 YIF1AO95070 293 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 PPYP01298 95 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 RAB3BP20337 219 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 MYL9P24844 172 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 FCGR2CP31995 323 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 OGFRL1Q5TC84 451 aaPredicted RBP13.25□□□□□ -0.29
ABCD4-228ENST00000557588 ZNF575Q86XF7 245 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 CENPSQ8N2Z9 138 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 MS4A6AQ9H2W1 248 aa13.25□□□□□ -0.29
ABCD4-228ENST00000557588 IGHV3OR16-13A0A075B7E8 117 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 IGHV3-74A0A0B4J1X5 117 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 MARCH11A6NNE9 402 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 M0R2N4 97 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 SCGNO76038 276 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 TRPT1Q86TN4 253 aaKnown RBP13.24□□□□□ -0.29
ABCD4-228ENST00000557588 STHQ8IWL8 128 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 FAM24BQ8N5W8 94 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 OR51H1Q8NH63 302 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 NXF2Q9GZY0 626 aaKnown RBP13.24□□□□□ -0.29
ABCD4-228ENST00000557588 VSIRQ9H7M9 311 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 PLA2G2EQ9NZK7 142 aa13.24□□□□□ -0.29
ABCD4-228ENST00000557588 RGS10O43665 173 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 SPP1P10451 314 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 C4BPBP20851 252 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 ARPC4P59998 168 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 ERVK-16P61578 105 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 RCN1Q15293 331 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 MORN3Q6PF18 240 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-228ENST00000557588 CADM3Q8N126 398 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 OR1P1Q8NH06 330 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 GIMAP1Q8WWP7 306 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 ST8SIA2Q92186 375 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 TXN2Q99757 166 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 HINT2Q9BX68 163 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 CCDC90BQ9GZT6 254 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 SLC5A7Q9GZV3 580 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 TPRKBQ9Y3C4 175 aa13.23□□□□□ -0.29
ABCD4-228ENST00000557588 DEFB131BA0A096LNP1 70 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 CASQ2O14958 399 aaPredicted RBP13.22□□□□□ -0.29
ABCD4-228ENST00000557588 PTHLHP12272 177 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 AADACL3Q5VUY0 350 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 ZNF818PQ6ZRF7 136 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 GINS3Q9BRX5 216 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 NDUFAF3Q9BU61 184 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 CELA1Q9UNI1 258 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 OR51B2Q9Y5P1 312 aa13.22□□□□□ -0.29
ABCD4-228ENST00000557588 I3L2K1 104 aa13.21□□□□□ -0.29
ABCD4-228ENST00000557588 DNASE2O00115 360 aaPredicted RBP13.21□□□□□ -0.29
ABCD4-228ENST00000557588 ST8SIA3O43173 380 aa13.21□□□□□ -0.29
ABCD4-228ENST00000557588 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.29
ABCD4-228ENST00000557588 MFAP4P55083 255 aa13.21□□□□□ -0.29
ABCD4-228ENST00000557588 C12orf74Q32Q52 190 aa13.21□□□□□ -0.29
ABCD4-228ENST00000557588 Q6ZR54 194 aa13.21□□□□□ -0.29
ABCD4-228ENST00000557588 NDUFB11Q9NX14 153 aa13.21□□□□□ -0.29
ABCD4-228ENST00000557588 LRP1BQ9NZR2 4599 aa13.21□□□□□ -0.29
ABCD4-228ENST00000557588 FXYD4P59646 89 aa13.2□□□□□ -0.3
ABCD4-228ENST00000557588 PRSS48Q7RTY5 328 aa13.2□□□□□ -0.3
ABCD4-228ENST00000557588 LILRB2Q8N423 598 aa13.2□□□□□ -0.3
ABCD4-228ENST00000557588 CSNK1G2-AS1Q8NCQ2 148 aa13.2□□□□□ -0.3
ABCD4-228ENST00000557588 SLC25A46Q96AG3 418 aa13.2□□□□□ -0.3
ABCD4-228ENST00000557588 TMEM56Q96MV1 263 aa13.2□□□□□ -0.3
ABCD4-228ENST00000557588 AGRNO00468 2067 aa13.2□□□□□ -0.3
ABCD4-228ENST00000557588 TRDV1A0A1B0GX56 115 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 APOHP02749 345 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-228ENST00000557588 CD74P04233 296 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 TOMM20LQ6UXN7 152 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 HOGA1Q86XE5 327 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 SCRT1Q9BWW7 348 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 VCXQ9H320 206 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 PRNDQ9UKY0 176 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 TBC1D24Q9ULP9 559 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 NSG2Q9Y328 171 aa13.19□□□□□ -0.3
ABCD4-228ENST00000557588 SMIM30A4D0T7 59 aa13.18□□□□□ -0.3
ABCD4-228ENST00000557588 SNAPC5O75971 98 aa13.18□□□□□ -0.3
ABCD4-228ENST00000557588 TBCEQ15813 527 aaPredicted RBP13.18□□□□□ -0.3
ABCD4-228ENST00000557588 ZNF767PQ75MW2 155 aa13.18□□□□□ -0.3
ABCD4-228ENST00000557588 ZNF367Q7RTV3 350 aa13.18□□□□□ -0.3
ABCD4-228ENST00000557588 TMEM17Q86X19 198 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms