RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NUDT9Q9BW91 350 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TSSK6Q9BXA6 273 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 SAMD10Q9BYL1 202 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 COA1Q9GZY4 146 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 LINC00597Q9H2U6 94 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ISG20L2Q9H9L3 353 aaKnown RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 RETNQ9HD89 108 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DUX4Q9UBX2 424 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 FUT9Q9Y231 359 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 CEP170Q5SW79 1584 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PLXNA3P51805 1871 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 NYNRINQ9P2P1 1898 aaKnown RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 NRXN3Q9Y4C0 1643 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 MAST2Q6P0Q8 1798 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 SLIT2O94813 1529 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DUXBA0A1W2PPF3 345 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 hADV38S2A0JD32 116 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 HMGB3O15347 200 aaKnown RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PITX3O75364 302 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DHRS3O75911 302 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 NCR2O95944 276 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 IGKV1D-16P01601 117 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 HBE1P02100 147 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 LGALS1P09382 135 aaKnown RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 IGLC6P0CF74 106 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DNAH10OSP0CZ25 163 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 GABRG2P18507 467 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 CXCL3P19876 107 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PSMB8P28062 276 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 S100A2P29034 98 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 FABP6P51161 128 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 AKR1C2P52895 323 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 RAB8AP61006 207 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PPP1R1AQ13522 171 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF404Q494X3 552 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR2T5Q6IEZ7 315 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 UNQ5815/PRO19632Q6UWF5 114 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 FAM231DQ6ZW35 169 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PIANPQ8IYJ0 282 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 CEND1Q8N111 149 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM86AQ8N2M4 240 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR5A1Q8NGJ0 315 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR2T29Q8NH02 315 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR8S1Q8NH09 359 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR4A5Q8NH83 315 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 POP5Q969H6 163 aaKnown RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM54Q969K7 222 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ADAT3Q96EY9 351 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF799Q96GE5 643 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 C16orf74Q96GX8 76 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 LINC01600Q96MT4 127 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 RDH12Q96NR8 316 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR4C12Q96R67 309 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF649Q9BS31 505 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PDFQ9HBH1 243 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 LYRM2Q9NU23 88 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TAS2R8Q9NYW2 309 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PRO0461Q9UI25 63 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 MPC1Q9Y5U8 109 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 COL4A6Q14031 1691 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 LMO7Q8WWI1 1683 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 MYO10Q9HD67 2058 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 LRRC37A3O60309 1634 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PLIN4Q96Q06 1357 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 A0A087WWC5 75 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 A0A0B4J2A0 478 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TCRBV3S1A0A5B6 114 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR4C45A6NMZ5 311 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 C9JQL5 133 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OVOL1O14753 267 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TRAF3IP2O43734 574 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 EPPINO95925 133 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 CA1P00915 261 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 IGLC2P0DOY2 106 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 IGLC3P0DOY3 106 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ERGP11308 486 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H1DP16402 221 aaKnown RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 MGMTP16455 207 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 CRISP2P16562 243 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TSPOP30536 169 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PYCR1P32322 319 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PPICP45877 212 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF140P52738 457 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 GRB2P62993 217 aaKnown RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ELOBQ15370 118 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 SPA17Q15506 151 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 IQCJQ1A5X6 159 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 FAM27D1Q5T7N8 215 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 C1orf195Q5TG92 126 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM236Q5W0B7 351 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR10K2Q6IF99 312 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 AMTNQ6UX39 209 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF550Q7Z398 422 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF695Q8IW36 515 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 C6orf223Q8N319 242 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 SLC35G3Q8N808 338 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR2K2Q8NGT1 345 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR1L1Q8NH94 360 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 RDH5Q92781 318 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms