RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 IGHG3P01860 377 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 TOMM20LQ6UXN7 152 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 SEM1Q6ZVN7 128 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 GGTLC1Q9BX51 225 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 RNASE7Q9H1E1 156 aaKnown RBP11.33□□□□□ -0.6
LINC00639-205ENST00000557440 PITPNC1Q9UKF7 332 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 GFRA3O60609 400 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 RPL29P47914 159 aaKnown RBP11.33□□□□□ -0.6
LINC00639-205ENST00000557440 HIST3H2BBQ8N257 126 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 NPIPB3Q92617 1050 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 TMEM18Q96B42 140 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 HIST1H2BLQ99880 126 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 NABP2Q9BQ15 211 aa11.33□□□□□ -0.6
LINC00639-205ENST00000557440 ZNF124Q15973 351 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 C1orf229Q6ZS94 237 aaPredicted RBP11.32□□□□□ -0.6
LINC00639-205ENST00000557440 Q8TCH9 128 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 FLYWCH2Q96CP2 140 aaKnown RBP11.32□□□□□ -0.6
LINC00639-205ENST00000557440 LINC00479Q96M42 142 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 MS4A10Q96PG2 267 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 WDR83OSQ9Y284 106 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 FAM215AQ9Y5M1 114 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 HELTA6NFD8 242 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 CXorf1O96002 111 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 IL3RAP26951 378 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 GCHFRP30047 84 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 GNB2P62879 340 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 LEMD1Q68G75 181 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 TMEM256Q8N2U0 113 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 PPIAL4EA0A075B759 164 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 A0A087WWC5 75 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 PPIAL4DF5H284 164 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 PPIAL4FP0DN26 164 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 LGALS4P56470 323 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 LRRC10Q5BKY1 277 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 CTDSP1Q9GZU7 261 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 TUBG2Q9NRH3 451 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 IDI2-AS1Q9NZ38 188 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 PPIAL4AQ9Y536 164 aa11.32□□□□□ -0.6
LINC00639-205ENST00000557440 MYO18BQ8IUG5 2567 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 J3QW42 95 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 LINC00869P0C866 280 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 SAA1P0DJI8 122 aaPredicted RBP11.31□□□□□ -0.6
LINC00639-205ENST00000557440 NPPCP23582 126 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 RELBQ01201 579 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 TRAT1Q6PIZ9 186 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 LYPD2Q6UXB3 125 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 RAB9BQ9NP90 201 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 TMEM250H0YL14 139 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 PYYP10082 97 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 EFNB3Q15768 340 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 TGIF2LXQ8IUE1 241 aa11.31□□□□□ -0.6
LINC00639-205ENST00000557440 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
LINC00639-205ENST00000557440 ASH1LQ9NR48 2969 aaKnown RBP11.31□□□□□ -0.6
LINC00639-205ENST00000557440 IFITM10A6NMD0 228 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 NPIPB11E5RHQ5 1161 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 TIMP3P35625 211 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 CNN1P51911 297 aaKnown RBP11.3□□□□□ -0.6
LINC00639-205ENST00000557440 ARSJQ5FYB0 599 aaPredicted RBP11.3□□□□□ -0.6
LINC00639-205ENST00000557440 SFRP2Q96HF1 295 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 ZNF714Q96N38 554 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 HES4Q9HCC6 221 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 ONECUT1Q9UBC0 465 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 PAM16Q9Y3D7 125 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 YTHDF2Q9Y5A9 579 aaKnown RBP11.3□□□□□ -0.6
LINC00639-205ENST00000557440 DSCAMO60469 2012 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 LMO1P25800 156 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 RND2P52198 227 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 OR5AU1Q8NGC0 362 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 SRD5A3Q9H8P0 318 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 HILPDAQ9Y5L2 63 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 IGHV3OR16-8A0A075B7F1 116 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 TRAV1-1A0A0B4J248 108 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 SRRM4A7MD48 611 aaKnown RBP11.3□□□□□ -0.6
LINC00639-205ENST00000557440 RBFOX2O43251 390 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00639-205ENST00000557440 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 OR1L6Q8NGR2 347 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 ASCL2Q99929 193 aa11.3□□□□□ -0.6
LINC00639-205ENST00000557440 PDE6DO43924 150 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 YPEL1O60688 119 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 RBP4P02753 201 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 TMEM11P17152 192 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 YPEL2Q96QA6 119 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 CRISP2P16562 243 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 HLA-DRB5Q30154 266 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 BTF3L4Q96K17 158 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 RBM14Q96PK6 669 aaKnown RBP11.29□□□□□ -0.6
LINC00639-205ENST00000557440 POLQO75417 2590 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 A0A1B0GW64 132 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 AMBPP02760 352 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
LINC00639-205ENST00000557440 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
LINC00639-205ENST00000557440 CENPWQ5EE01 88 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 GAL3ST2Q9H3Q3 398 aa11.29□□□□□ -0.6
LINC00639-205ENST00000557440 KLF2Q9Y5W3 355 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms