RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 RARRES2Q99969 163 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 C21orf62Q9NYP8 219 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 ETV7Q9Y603 341 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 F11RQ9Y624 299 aaKnown RBP10.34□□□□□ -0.75
SLIRP-210ENST00000557431 DBX1A6NMT0 343 aa10.33□□□□□ -0.76
SLIRP-210ENST00000557431 RBFOX2O43251 390 aaKnown RBP eCLIP10.33□□□□□ -0.76
SLIRP-210ENST00000557431 RLN1P04808 185 aa10.33□□□□□ -0.76
SLIRP-210ENST00000557431 SMIM18P0DKX4 95 aa10.33□□□□□ -0.76
SLIRP-210ENST00000557431 CROCCP3Q8IVE0 287 aa10.33□□□□□ -0.76
SLIRP-210ENST00000557431 TMEM217Q8N7C4 229 aa10.33□□□□□ -0.76
SLIRP-210ENST00000557431 FUNDC2Q9BWH2 189 aa10.33□□□□□ -0.76
SLIRP-210ENST00000557431 IGHV7-4-1A0A0J9YVY3 117 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 MARCH11A6NNE9 402 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 CHEK1O14757 476 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 ATF4P18848 351 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-210ENST00000557431 G6PCP35575 357 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 LPAR6P43657 344 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 RBMS2Q15434 407 aaKnown RBP10.32□□□□□ -0.76
SLIRP-210ENST00000557431 ZBTB34Q8NCN2 500 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 OR11H2Q8NH07 326 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 C11orf45Q8TAV5 145 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 RHPN1-AS1Q9BWJ2 59 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 PLEKHA2Q9HB19 425 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 NDUFA4L2Q9NRX3 87 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 OR51B2Q9Y5P1 312 aa10.32□□□□□ -0.76
SLIRP-210ENST00000557431 IGHV3-66A0A0C4DH42 116 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 MPTX1A8MV57 137 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 YIF1AO95070 293 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 KRASP01116 189 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 CTSGP08311 255 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 GNRHRP30968 328 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 MSMO1Q15800 293 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 SPSB3Q6PJ21 355 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 FCAMRQ8WWV6 532 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 MISP3Q96FF7 219 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 SRSF8Q9BRL6 282 aaKnown RBP10.31□□□□□ -0.76
SLIRP-210ENST00000557431 AIFM2Q9BRQ8 373 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 EHFQ9NZC4 300 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 COMMD9Q9P000 198 aa10.31□□□□□ -0.76
SLIRP-210ENST00000557431 A0A0A6YYH2 397 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 A6NJ64 397 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 K7EMT4 169 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 NUPL2O15504 423 aaKnown RBP10.3□□□□□ -0.76
SLIRP-210ENST00000557431 CA1P00915 261 aaPredicted RBP10.3□□□□□ -0.76
SLIRP-210ENST00000557431 HERV-K104P61576 105 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 ERVK-16P61578 105 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 NCS1P62166 190 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 LEMD1Q68G75 181 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 FAM24BQ8N5W8 94 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 TMEM116Q8NCL8 245 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 LSM10Q969L4 123 aaKnown RBP10.3□□□□□ -0.76
SLIRP-210ENST00000557431 FXYD6Q9H0Q3 95 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 AUNIPQ9H7T9 357 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 DIABLOQ9NR28 239 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
SLIRP-210ENST00000557431 C15orf62A8K5M9 175 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 CYB5BO43169 146 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 PMP2P02689 132 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 APOHP02749 345 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-210ENST00000557431 RFX2P48378 723 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 VBP1P61758 197 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 SPINK9Q5DT21 86 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 THOC7Q6I9Y2 204 aaKnown RBP10.29□□□□□ -0.76
SLIRP-210ENST00000557431 LILRB2Q8N423 598 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 OR5AP2Q8NGF4 316 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 GIMAP1Q8WWP7 306 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 SLC25A46Q96AG3 418 aa10.29□□□□□ -0.76
SLIRP-210ENST00000557431 ZNF2Q9BSG1 426 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-210ENST00000557431 MRPS26Q9BYN8 205 aaKnown RBP10.29□□□□□ -0.76
SLIRP-210ENST00000557431 C6orf62Q9GZU0 229 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-210ENST00000557431 IGLL5B9A064 214 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 PGLYRP1O75594 196 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-210ENST00000557431 IFNA4P05014 189 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 F2RP25116 425 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 FAM90A2PQ658T7 463 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 TCF24Q7RTU0 167 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 C2CD4CQ8TF44 421 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 GATAD1Q8WUU5 269 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 ST8SIA2Q92186 375 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 PINX1Q96BK5 328 aaKnown RBP10.28□□□□□ -0.76
SLIRP-210ENST00000557431 S100A16Q96FQ6 103 aaKnown RBP10.28□□□□□ -0.76
SLIRP-210ENST00000557431 NAA50Q9GZZ1 169 aaKnown RBP10.28□□□□□ -0.76
SLIRP-210ENST00000557431 C11orf68Q9H3H3 251 aaKnown RBP10.28□□□□□ -0.76
SLIRP-210ENST00000557431 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
SLIRP-210ENST00000557431 FAT2Q9NYQ8 4349 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 I3L2K1 104 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 XRCC3O43542 346 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 SNAPC5O75971 98 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 GABARAPO95166 117 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 ALDH3B2P48448 385 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 DEFB131AP59861 70 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 CTF1Q16619 201 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 PHLDA2Q53GA4 152 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 UBE2NLQ5JXB2 153 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 SAMD12Q8N8I0 201 aa10.27□□□□□ -0.77
SLIRP-210ENST00000557431 DGCR14Q96DF8 476 aaKnown RBP10.27□□□□□ -0.77
SLIRP-210ENST00000557431 IFT46Q9NQC8 304 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms