RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RBPMSQ93062 196 aaKnown RBP9.59□□□□□ -0.87
SLIRP-209ENST00000557342 OR4C12Q96R67 309 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 SLC25A21Q9BQT8 299 aaPredicted RBP9.59□□□□□ -0.87
SLIRP-209ENST00000557342 PDCD10Q9BUL8 212 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
SLIRP-209ENST00000557342 PIGBOS1A0A0B4J2F0 54 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 NAP1L6A6NFF2 107 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 DBX1A6NMT0 343 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 TRBV12-3P01733 135 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 P0C879 139 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 ANXA3P12429 323 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 ERHP84090 104 aaKnown RBP9.58□□□□□ -0.88
SLIRP-209ENST00000557342 BAK1Q16611 211 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 SLC25A24Q6NUK1 477 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 C19orf35Q6ZS72 473 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 GALNT14Q96FL9 552 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 PLEKHA3Q9HB20 300 aa9.58□□□□□ -0.88
SLIRP-209ENST00000557342 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 BMPR1BO00238 502 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 GGCTO75223 188 aaKnown RBP9.57□□□□□ -0.88
SLIRP-209ENST00000557342 AKR1C4P17516 323 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 SYNJ2BPP57105 145 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 SRPXP78539 464 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 IFITM3Q01628 133 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 TMEM268Q5VZI3 342 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 SELENOHQ8IZQ5 122 aaKnown RBP9.57□□□□□ -0.88
SLIRP-209ENST00000557342 OR2C3Q8N628 320 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 SLC35G3Q8N808 338 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 OR9G4Q8NGQ1 327 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 VN1R17PQ8TDU5 208 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 IL22RA2Q969J5 263 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 TMEM230Q96A57 120 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 TMEM56-RWDD3S4R434 201 aa9.57□□□□□ -0.88
SLIRP-209ENST00000557342 A0A0B4J293 547 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 CENPXA8MT69 81 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 ST8SIA3O43173 380 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 IFNA17P01571 189 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 ARL3P36405 182 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 TMEM187Q14656 261 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 RBMS2Q15434 407 aaKnown RBP9.56□□□□□ -0.88
SLIRP-209ENST00000557342 IZUMO4Q1ZYL8 232 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 TMEM128Q5BJH2 165 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 CLEC19AQ6UXS0 136 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 TMED4Q7Z7H5 227 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 ZNF114Q8NC26 417 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 OR1P1Q8NH06 330 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 LHFPL5Q8TAF8 219 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 CCDC140Q96MF4 163 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 C7orf50Q9BRJ6 194 aaKnown RBP9.56□□□□□ -0.88
SLIRP-209ENST00000557342 ENY2Q9NPA8 101 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.56□□□□□ -0.88
SLIRP-209ENST00000557342 CACFD1Q9UGQ2 172 aa9.56□□□□□ -0.88
SLIRP-209ENST00000557342 A0A0G2JRQ6 117 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 MFSD2BA6NFX1 497 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 INS-IGF2F8WCM5 200 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 IGHV3-23P01764 117 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 GPHB5Q86YW7 130 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 LGI3Q8N145 548 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 OR52E5Q8NH55 327 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 ZNF502Q8TBZ5 544 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 SIGLEC8Q9NYZ4 499 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
SLIRP-209ENST00000557342 DMRT1Q9Y5R6 373 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 S4R3C0 116 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 MEGF8Q7Z7M0 2845 aa9.55□□□□□ -0.88
SLIRP-209ENST00000557342 A0A0B4J2A0 478 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 WI2-2373I1.2A0A1W2PRP0 233 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 K7EIL1 84 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 CLEC3BP05452 202 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 SNCAP37840 140 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 HOXA1P49639 335 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-209ENST00000557342 SUB1P53999 127 aaKnown RBP eCLIP9.54□□□□□ -0.88
SLIRP-209ENST00000557342 MFAP2P55001 183 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 DEFA1P59665 94 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 DEFA3P59666 94 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 SPCS3P61009 180 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 SUPT4H1P63272 117 aaKnown RBP9.54□□□□□ -0.88
SLIRP-209ENST00000557342 ASAH1Q13510 395 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 FAM106AQ4KMX7 169 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 AARDQ4LEZ3 155 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 CENPSQ8N2Z9 138 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 GPR146Q96CH1 333 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 GAR1Q9NY12 217 aaKnown RBP9.54□□□□□ -0.88
SLIRP-209ENST00000557342 SHPKQ9UHJ6 478 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 TBC1D24Q9ULP9 559 aa9.54□□□□□ -0.88
SLIRP-209ENST00000557342 DUXBA0A1W2PPF3 345 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 LGALS9O00182 355 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 OR2C1O95371 312 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 LY86O95711 162 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 CSN3P07498 182 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 SULT1A3P0DMM9 295 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 SULT1A4P0DMN0 295 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 GPR183P32249 361 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 UBE2MP61081 183 aaKnown RBP9.53□□□□□ -0.88
SLIRP-209ENST00000557342 SPINK9Q5DT21 86 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 SPSB3Q6PJ21 355 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms