RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TMEM14BQ9NUH8 114 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 ZNRD1Q9P1U0 126 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 OR51B2Q9Y5P1 312 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 F2RL2O00254 374 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 AREGP15514 252 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 CX3CL1P78423 397 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 VHLLQ6RSH7 139 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 Q8N976 141 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 TMEM178AQ8NBL3 297 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 NEUROG1Q92886 237 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 IL19Q9UHD0 177 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 A0A1W2PS18 150 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 GGTLC3B5MD39 225 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 ZNF253O75346 499 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
SRP54-213ENST00000556994 SRIP30626 198 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 ZNF83P51522 516 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 MMDQ15546 238 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 C17orf58Q2M2W7 97 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 LINC00479Q96M42 142 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 OR2V2Q96R30 315 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 SLC45A2Q9UMX9 530 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 FOXA2Q9Y261 457 aaPredicted RBP9.33□□□□□ -0.92
SRP54-213ENST00000556994 LY96Q9Y6Y9 160 aa9.33□□□□□ -0.92
SRP54-213ENST00000556994 J3QR06 171 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 TIGITQ495A1 244 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 SPATA45Q537H7 98 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 DEFB108BQ8NET1 73 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 FAM168AQ92567 244 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 SSBP3Q9BWW4 388 aaPredicted RBP9.32□□□□□ -0.92
SRP54-213ENST00000556994 WNT10AQ9GZT5 417 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 PLEKHA3Q9HB20 300 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 ZNF586Q9NXT0 402 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 TRAV5A0A0B4J249 113 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 SRRM4A7MD48 611 aaKnown RBP9.32□□□□□ -0.92
SRP54-213ENST00000556994 SPRY3O43610 288 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 IGKV1-16P04430 117 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 KIR2DS2P43631 304 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 CCL11P51671 97 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 MRPS11P82912 194 aaKnown RBP9.32□□□□□ -0.92
SRP54-213ENST00000556994 GUSBP1Q15486 140 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 PRR31Q5SQ13 230 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 MBNL2Q5VZF2 373 aaKnown RBP9.32□□□□□ -0.92
SRP54-213ENST00000556994 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 OR9G1Q8NH87 305 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 PPP1R35Q8TAP8 253 aa9.32□□□□□ -0.92
SRP54-213ENST00000556994 TRBV9A0A0B4J1U6 114 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 BMPR1BO00238 502 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 MMP23AO75900 390 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 IGLV2-8P01709 118 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 SRSF6Q13247 344 aaKnown RBP9.31□□□□□ -0.92
SRP54-213ENST00000556994 CR1LQ2VPA4 569 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 IBA57Q5T440 356 aaKnown RBP9.31□□□□□ -0.92
SRP54-213ENST00000556994 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 OR10W1Q8NGF6 305 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 TMEM167BQ9NRX6 74 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 TECRQ9NZ01 308 aaKnown RBP9.31□□□□□ -0.92
SRP54-213ENST00000556994 CD59P13987 128 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 NTF3P20783 257 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 KCNS1Q96KK3 526 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 CDC42EP3Q9UKI2 254 aa9.31□□□□□ -0.92
SRP54-213ENST00000556994 IGLV1-44P01699 117 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 CGB3P0DN86 165 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 CGB7P0DN87 165 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 RAB7AP51149 207 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 MAJINQ3KP22 176 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 HES3Q5TGS1 186 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 C1orf174Q8IYL3 243 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 ITLN1Q8WWA0 313 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 RND1Q92730 232 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 SNRNP40Q96DI7 357 aaKnown RBP9.3□□□□□ -0.92
SRP54-213ENST00000556994 STARD4Q96DR4 205 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 RNF2Q99496 336 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 OSTCQ9NRP0 149 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 SLC25A10Q9UBX3 287 aaPredicted RBP9.3□□□□□ -0.92
SRP54-213ENST00000556994 TRAV34A0A0B4J273 112 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 KBTBD11-OT1A0A1B0GTJ5 212 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 TEX50A0A1B0GTY4 177 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 NKX2-8O15522 239 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 IGHV3-48P01763 117 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 AMY1AP04745 511 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 C3orf79P0CE67 100 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 CTRLP40313 264 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 SLAQ13239 276 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 OR10J3Q5JRS4 329 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 WDR73Q6P4I2 378 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 OR4B1Q8NGF8 309 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 OR2T6Q8NHC8 308 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 CORO2AQ92828 525 aa9.3□□□□□ -0.92
SRP54-213ENST00000556994 DSCAML1Q8TD84 2053 aa9.29□□□□□ -0.92
SRP54-213ENST00000556994 M0R1B8 84 aa9.29□□□□□ -0.92
SRP54-213ENST00000556994 ZNF324O75467 553 aaPredicted RBP9.29□□□□□ -0.92
SRP54-213ENST00000556994 MT-ND6P03923 174 aa9.29□□□□□ -0.92
SRP54-213ENST00000556994 SSBP2P81877 361 aaPredicted RBP9.29□□□□□ -0.92
SRP54-213ENST00000556994 NIT1Q86X76 327 aa9.29□□□□□ -0.92
SRP54-213ENST00000556994 FDCSPQ8NFU4 85 aa9.29□□□□□ -0.92
SRP54-213ENST00000556994 TSKUQ8WUA8 353 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms