RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ERVK-16P61578 105 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 SRPXP78539 464 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 NDPQ00604 133 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 SMCO1Q147U7 214 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 PLGLAQ15195 96 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 TNXAQ16473 311 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 PRSS8Q16651 343 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 C5orf64Q2M2E5 130 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 TMEM95Q3KNT9 176 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 VMA21Q3ZAQ7 101 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 C9orf152Q5JTZ5 239 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 DHRS7BQ6IAN0 325 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-244ENST00000556898 ZNF575Q86XF7 245 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 FAM71E2Q8N5Q1 922 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 C5orf56Q8N8D9 126 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 OR10W1Q8NGF6 305 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 OR4A16Q8NH70 328 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 CD300LFQ8TDQ1 290 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 ST8SIA2Q92186 375 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 RRNAD1Q96FB5 475 aaKnown RBP4.18□□□□□ -1.74
ATXN3-244ENST00000556898 BSCL2Q96G97 398 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-244ENST00000556898 RBM14Q96PK6 669 aaKnown RBP4.18□□□□□ -1.74
ATXN3-244ENST00000556898 TSNAXQ99598 290 aaKnown RBP4.18□□□□□ -1.74
ATXN3-244ENST00000556898 HINT2Q9BX68 163 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 RBKSQ9H477 322 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 PRDM13Q9H4Q3 707 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 FAM212BQ9NTI7 297 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-244ENST00000556898 AURKAIP1Q9NWT8 199 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-244ENST00000556898 BET1LQ9NYM9 111 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 OR5AC2Q9NZP5 309 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 LINC00527Q9UJ94 153 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 SIGLEC9Q9Y336 463 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 TMED3Q9Y3Q3 217 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 OR51B2Q9Y5P1 312 aa4.18□□□□□ -1.74
ATXN3-244ENST00000556898 IGHV7-81A0A0B4J1V7 117 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 A0A1B0GU03 582 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 DUXBA0A1W2PPF3 345 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 FAM24AA6NFZ4 105 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 DNAJC9-AS1A6NH13 148 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 C15orf61A6NNL5 157 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 H3BP45 60 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 BOLA2-SMG1P6H3BVE0 249 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 WRBO00258 174 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 SSSCA1O60232 199 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 RBMXL2O75526 392 aaKnown RBP4.17□□□□□ -1.74
ATXN3-244ENST00000556898 TRAPPC2P0DI81 140 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 TRAPPC2BP0DI82 140 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 NKX2-1P43699 371 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-244ENST00000556898 LGALS7P47929 136 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 NKX2-5P52952 324 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-244ENST00000556898 PAX9P55771 341 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 BPIFB3P59826 476 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 RPL8P62917 257 aaKnown RBP4.17□□□□□ -1.74
ATXN3-244ENST00000556898 CX3CL1P78423 397 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 DEFA5Q01523 94 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 SRSF4Q08170 494 aaKnown RBP4.17□□□□□ -1.74
ATXN3-244ENST00000556898 ASPHD1Q5U4P2 390 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 THOC7Q6I9Y2 204 aaKnown RBP4.17□□□□□ -1.74
ATXN3-244ENST00000556898 AKAP14Q86UN6 197 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 PPP1R27Q86WC6 154 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 TEX45Q8NA69 505 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 OR11H4Q8NGC9 324 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 GRPEL2Q8TAA5 225 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 PPP1R1CQ8WVI7 109 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 RNF5Q99942 180 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 RASL11BQ9BPW5 248 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 RNF126Q9BV68 326 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 NMES1Q9C002 83 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 C11orf1Q9H5F2 150 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-244ENST00000556898 FAM30AQ9NZY2 134 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 KIAA1456Q9P272 454 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 FOXA2Q9Y261 457 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-244ENST00000556898 MOB4Q9Y3A3 225 aa4.17□□□□□ -1.74
ATXN3-244ENST00000556898 MSGN1A6NI15 193 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 CEBPZOSA8MTT3 80 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 TEX22C9J3V5 150 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 G3V318 75 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 GPR137BO60478 399 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 PFDN1O60925 122 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 SNAPC5O75971 98 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 ATG12O94817 140 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 SPDEFO95238 335 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 MPC2O95563 127 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 IFNA17P01571 189 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 PRH1P02810 166 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 GIPP09681 153 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-244ENST00000556898 EGR2P11161 476 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-244ENST00000556898 AREGP15514 252 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 VDAC2P45880 294 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-244ENST00000556898 RPL27AP46776 148 aaKnown RBP4.16□□□□□ -1.74
ATXN3-244ENST00000556898 ARHGDIBP52566 201 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 HSPE1P61604 102 aaKnown RBP4.16□□□□□ -1.74
ATXN3-244ENST00000556898 UBA52P62987 128 aaKnown RBP4.16□□□□□ -1.74
ATXN3-244ENST00000556898 WT1-ASQ06250 92 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 TNFRSF9Q07011 255 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 TMEM267Q0VDI3 215 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-244ENST00000556898 FXYD3Q14802 87 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 AANATQ16613 207 aa4.16□□□□□ -1.74
ATXN3-244ENST00000556898 C10orf99Q6UWK7 81 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms