RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 TMEM56Q96MV1 263 aa17.17■□□□□ 0.34
PABPN1-207ENST00000556821 C5orf66Q9H5L9 145 aa17.17■□□□□ 0.34
PABPN1-207ENST00000556821 THYN1Q9P016 225 aa17.17■□□□□ 0.34
PABPN1-207ENST00000556821 V9GYH0 126 aa17.17■□□□□ 0.34
PABPN1-207ENST00000556821 IZUMO1RA6ND01 250 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 LGALS9O00182 355 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 GPR183P32249 361 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 PRCDQ00LT1 54 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 GPHB5Q86YW7 130 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 Q8N1Y9 231 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 OR4A16Q8NH70 328 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 VN1R17PQ8TDU5 208 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 THAP7Q9BT49 309 aaPredicted RBP17.16■□□□□ 0.34
PABPN1-207ENST00000556821 GPR132Q9UNW8 380 aa17.16■□□□□ 0.34
PABPN1-207ENST00000556821 C2orf70A6NJV1 201 aa17.15■□□□□ 0.34
PABPN1-207ENST00000556821 ZNF701M0R085 212 aaPredicted RBP17.15■□□□□ 0.34
PABPN1-207ENST00000556821 CLEC3BP05452 202 aa17.15■□□□□ 0.34
PABPN1-207ENST00000556821 SLC25A24Q6NUK1 477 aa17.15■□□□□ 0.34
PABPN1-207ENST00000556821 TRIM63Q969Q1 353 aa17.15■□□□□ 0.34
PABPN1-207ENST00000556821 PRRT1Q99946 306 aa17.15■□□□□ 0.34
PABPN1-207ENST00000556821 ZC4H2Q9NQZ6 224 aa17.15■□□□□ 0.34
PABPN1-207ENST00000556821 SLC2A8Q9NY64 477 aa17.15■□□□□ 0.34
PABPN1-207ENST00000556821 C14orf166Q9Y224 244 aaKnown RBP17.15■□□□□ 0.34
PABPN1-207ENST00000556821 A0A0G2JRQ6 117 aa17.14■□□□□ 0.33
PABPN1-207ENST00000556821 OR5AC1P0C628 307 aa17.14■□□□□ 0.33
PABPN1-207ENST00000556821 AKR1C2P52895 323 aa17.14■□□□□ 0.33
PABPN1-207ENST00000556821 HSPE1P61604 102 aaKnown RBP17.14■□□□□ 0.33
PABPN1-207ENST00000556821 ZNF79Q15937 498 aa17.14■□□□□ 0.33
PABPN1-207ENST00000556821 OR2C3Q8N628 320 aa17.14■□□□□ 0.33
PABPN1-207ENST00000556821 LHFPL5Q8TAF8 219 aa17.14■□□□□ 0.33
PABPN1-207ENST00000556821 A0A0B4J293 547 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 TMEM213A2RRL7 107 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 A8MWP6 167 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 F8W735 103 aaPredicted RBP17.13■□□□□ 0.33
PABPN1-207ENST00000556821 K7EIM0 57 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 CYB5BO43169 146 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 TRIM16LQ309B1 348 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 Q8N402 240 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 GLYATL2Q8WU03 294 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 TMEM222Q9H0R3 208 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 NAA60Q9H7X0 242 aa17.13■□□□□ 0.33
PABPN1-207ENST00000556821 IGHV3-21A0A0B4J1V1 117 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 B3GALNT1O75752 331 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 FOLR2P14207 255 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 LCN12Q6JVE5 192 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 UNQ9165/PRO28630Q6UXU0 137 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 CCDC190Q86UF4 302 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 ZNF114Q8NC26 417 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 OR1P1Q8NH06 330 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 SCARB1Q8WTV0 552 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 CACNG8Q8WXS5 425 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 ASCL2Q99929 193 aa17.12■□□□□ 0.33
PABPN1-207ENST00000556821 CRYM-AS1A6NIL9 109 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 ST8SIA3O43173 380 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 TGOLN2O43493 480 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 CDS2O95674 445 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 FRMD6-AS1P0C7T7 363 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 NHLRC4P0CG21 123 aaPredicted RBP17.11■□□□□ 0.33
PABPN1-207ENST00000556821 KLF9Q13886 244 aaPredicted RBP17.11■□□□□ 0.33
PABPN1-207ENST00000556821 CD300EQ496F6 205 aaPredicted RBP17.11■□□□□ 0.33
PABPN1-207ENST00000556821 SPINK9Q5DT21 86 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 OR2K2Q8NGT1 345 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 TMEM230Q96A57 120 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 U3KQK5 164 aa17.11■□□□□ 0.33
PABPN1-207ENST00000556821 STAB2Q8WWQ8 2551 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 IGHV3-35A0A0C4DH35 117 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 TEX13DA0A0J9YY54 714 aaPredicted RBP17.1■□□□□ 0.33
PABPN1-207ENST00000556821 ATG12O94817 140 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 DEFB114Q30KQ6 69 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 PLET1Q6UQ28 207 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 Q6ZRM9 215 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 OR1L6Q8NGR2 347 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 PLEKHA3Q9HB20 300 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 MCUBQ9NWR8 336 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 C21orf62Q9NYP8 219 aa17.1■□□□□ 0.33
PABPN1-207ENST00000556821 ZNF320A2RRD8 509 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 OR2T8A6NH00 312 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 CBLN1P23435 193 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 S100A5P33763 92 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 FAM106AQ4KMX7 169 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 PYDC2Q56P42 97 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 SBSPONQ8IVN8 264 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 DYNLRB2Q8TF09 96 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 ZNF414Q96IQ9 312 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 ZNF436Q9C0F3 470 aaPredicted RBP17.09■□□□□ 0.33
PABPN1-207ENST00000556821 SCP2D1Q9UJQ7 156 aa17.09■□□□□ 0.33
PABPN1-207ENST00000556821 I3L2K1 104 aa17.08■□□□□ 0.32
PABPN1-207ENST00000556821 IGHV4-30-4P0DP06 118 aa17.08■□□□□ 0.32
PABPN1-207ENST00000556821 ADMP35318 185 aa17.08■□□□□ 0.32
PABPN1-207ENST00000556821 SELENOHQ8IZQ5 122 aaKnown RBP17.08■□□□□ 0.32
PABPN1-207ENST00000556821 RBPMSQ93062 196 aaKnown RBP17.08■□□□□ 0.32
PABPN1-207ENST00000556821 BSCL2Q96G97 398 aaPredicted RBP17.08■□□□□ 0.32
PABPN1-207ENST00000556821 ATP6V0BQ99437 205 aa17.08■□□□□ 0.32
PABPN1-207ENST00000556821 CHRDL1Q9BU40 450 aa17.08■□□□□ 0.32
PABPN1-207ENST00000556821 SELENOKQ9Y6D0 94 aa17.08■□□□□ 0.32
PABPN1-207ENST00000556821 ZNF785A8K8V0 405 aa17.07■□□□□ 0.32
PABPN1-207ENST00000556821 INS-IGF2F8WCM5 200 aa17.07■□□□□ 0.32
PABPN1-207ENST00000556821 AARDQ4LEZ3 155 aa17.07■□□□□ 0.32
PABPN1-207ENST00000556821 TM4SF20Q53R12 229 aa17.07■□□□□ 0.32
PABPN1-207ENST00000556821 SLC35G3Q8N808 338 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms