RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SPINK2P20155 84 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 RUNX1Q01196 453 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 PRDX4Q13162 271 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 CATR1Q13166 79 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 TBC1D28Q2M2D7 210 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 KIAA1644Q3SXP7 199 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 SAXO1Q8IYX7 474 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 PNKDQ8N490 385 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 OR1L8Q8NGR8 309 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 APOBEC3DQ96AK3 386 aaPredicted RBP4.25□□□□□ -1.73
TMEM260-210ENST00000556422 HIST1H2AAQ96QV6 131 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 RNF126Q9BV68 326 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 NMES1Q9C002 83 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 CLCF1Q9UBD9 225 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 HEATR1Q9H583 2144 aaKnown RBP4.25□□□□□ -1.73
TMEM260-210ENST00000556422 CEP295Q9C0D2 2601 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 KIAA2026Q5HYC2 2103 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 EEF1E1-BLOC1S5C9J1V9 151 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 J3KT08 172 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 J3QR06 171 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 ATP5LO75964 103 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 RPL7P18124 248 aaKnown RBP4.25□□□□□ -1.73
TMEM260-210ENST00000556422 BCL3P20749 454 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 P2RY1P47900 373 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 VWC2Q2TAL6 325 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 DGAT2L7PQ6IED9 249 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 TMEM178AQ8NBL3 297 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.25□□□□□ -1.73
TMEM260-210ENST00000556422 TMED6Q8WW62 240 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 ADTRPQ96IZ2 230 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF835Q9Y2P0 537 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 PIEZO2Q9H5I5 2752 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 KBTBD11-OT1A0A1B0GTJ5 212 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 PDCD6O75340 191 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 CELA3BP08861 270 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 CCL11P51671 97 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 PSG9Q00887 426 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 PSG5Q15238 335 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 IGFBP7Q16270 282 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 LRRC10Q5BKY1 277 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 MEIG1Q5JSS6 88 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
TMEM260-210ENST00000556422 SUMF2Q8NBJ7 301 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 WIPF2Q8TF74 440 aaPredicted RBP4.24□□□□□ -1.73
TMEM260-210ENST00000556422 RP1L1Q8IWN7 2480 aaPredicted RBP4.24□□□□□ -1.73
TMEM260-210ENST00000556422 EPG5Q9HCE0 2579 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 CADP27708 2225 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 MED19A0JLT2 244 aaPredicted RBP4.24□□□□□ -1.73
TMEM260-210ENST00000556422 MSGN1A6NI15 193 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 CRYM-AS1A6NIL9 109 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 F2RL2O00254 374 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 MPPED1O15442 326 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 FGF16O43320 207 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 BCL2L11O43521 198 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 MPDU1O75352 247 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 CA1P00915 261 aaPredicted RBP4.24□□□□□ -1.73
TMEM260-210ENST00000556422 RPS23P62266 143 aaKnown RBP4.24□□□□□ -1.73
TMEM260-210ENST00000556422 ACTL10Q5JWF8 245 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF429Q86V71 674 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 MDP1Q86V88 176 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 ATP5SQ99766 215 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 SAMD10Q9BYL1 202 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 PATZ1Q9HBE1 687 aaKnown RBP4.24□□□□□ -1.73
TMEM260-210ENST00000556422 MAP1BP46821 2468 aaKnown RBP4.24□□□□□ -1.73
TMEM260-210ENST00000556422 LRP5LA4QPB2 252 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 TMEM8BA6NDV4 472 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 CD300LBA8K4G0 201 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 SYNGR1O43759 233 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 CD3EP07766 207 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 IGHV1-2P23083 117 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 FGF12P61328 243 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 TGFBR3Q03167 851 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 PRSS8Q16651 343 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 LINC00477Q96M19 166 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 ACACAQ13085 2346 aa4.24□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF727A8MUV8 499 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 TM4SF5O14894 197 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 NAPSAO96009 420 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 TAL2Q16559 108 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM162BQ5T6X4 162 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 WDR86Q86TI4 376 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 TMEM37Q8WXS4 190 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 OR5P3Q8WZ94 311 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 GMPPAQ96IJ6 420 aaPredicted RBP4.23□□□□□ -1.73
TMEM260-210ENST00000556422 DIDO1Q9BTC0 2240 aaKnown RBP4.23□□□□□ -1.73
TMEM260-210ENST00000556422 TRAV24A0A0B4J272 114 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A18PA6NE21 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A16PA6NEW6 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A9PA6NNJ1 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A5PA8MXJ8 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF732B4DXR9 585 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FCGR3BO75015 233 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 REG1AP05451 166 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A15PP0C7V4 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A14PP0C7W9 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 MALLQ13021 153 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 TIGITQ495A1 244 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 C20orf204Q6ZNR8 217 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 OR4C13Q8NGP0 309 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms