RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 PINX1Q96BK5 328 aaKnown RBP7.3□□□□□ -1.24
ACTN1-218ENST00000556343 SONP18583 2426 aaKnown RBP7.29□□□□□ -1.24
ACTN1-218ENST00000556343 KANTRA0A1W2PQU2 76 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 NPIPB5A8MRT5 1133 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 TEX22C9J3V5 150 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 TAAR5O14804 337 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 IGF1P05019 195 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 RNASE1P07998 156 aaKnown RBP7.29□□□□□ -1.24
ACTN1-218ENST00000556343 HKR1P10072 659 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 MYOD1P15172 320 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 PAX9P55771 341 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 BLCAPP62952 87 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 EIF5AP63241 154 aaKnown RBP7.29□□□□□ -1.24
ACTN1-218ENST00000556343 SLC35B1P78383 322 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 ZNF345Q14585 488 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 C10orf55Q5SWW7 151 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 SLC25A24Q6NUK1 477 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 ETV3LQ6ZN32 361 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 OR10W1Q8NGF6 305 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 OR1S2Q8NGQ3 325 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 OR1P1Q8NH06 330 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 RNASEH2CQ8TDP1 164 aaKnown RBP7.29□□□□□ -1.24
ACTN1-218ENST00000556343 AQP10Q96PS8 301 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 ZNF580Q9UK33 172 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 TNFSF18Q9UNG2 199 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 HIVEP1P15822 2718 aa7.29□□□□□ -1.24
ACTN1-218ENST00000556343 BORCS7-ASMTA0A0B4J1R7 106 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 TRAV41A0A0B4J266 112 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 IGLC7A0M8Q6 106 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 E7EUB6 86 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 H3BP45 60 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 H3BUA1 57 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 ATP6V0E1O15342 81 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 SCGB2A1O75556 95 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 DFFBO76075 338 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 AMY1AP04745 511 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 CRYGCP07315 174 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 CRIP2P52943 208 aaPredicted RBP7.28□□□□□ -1.24
ACTN1-218ENST00000556343 UBA52P62987 128 aaKnown RBP7.28□□□□□ -1.24
ACTN1-218ENST00000556343 EWSR1Q01844 656 aaKnown RBP eCLIP7.28□□□□□ -1.24
ACTN1-218ENST00000556343 WT1-ASQ06250 92 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 EXOSC2Q13868 293 aaKnown RBP7.28□□□□□ -1.24
ACTN1-218ENST00000556343 ECSCRQ19T08 205 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 FBLN7Q53RD9 439 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 TMEM14EPQ6UXP3 125 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 ZNF114Q8NC26 417 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 LFNGQ8NES3 379 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 OR11H4Q8NGC9 324 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 OR2T6Q8NHC8 308 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 FAM110DQ8TAY7 271 aaPredicted RBP7.28□□□□□ -1.24
ACTN1-218ENST00000556343 DUX5Q96PT3 197 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 HSPB9Q9BQS6 159 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 FAM103A1Q9BTL3 118 aaKnown RBP7.28□□□□□ -1.24
ACTN1-218ENST00000556343 GGACTQ9BVM4 153 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 WNT10AQ9GZT5 417 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 C11orf1Q9H5F2 150 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 ZNF355PQ9NSJ1 428 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 HSPB11Q9Y547 144 aa7.28□□□□□ -1.24
ACTN1-218ENST00000556343 F11RQ9Y624 299 aaKnown RBP7.28□□□□□ -1.24
ACTN1-218ENST00000556343 CELSR1Q9NYQ6 3014 aa7.27□□□□□ -1.24
ACTN1-218ENST00000556343 ANK3Q12955 4377 aaKnown RBP7.27□□□□□ -1.24
ACTN1-218ENST00000556343 SH2D7A6NKC9 451 aaPredicted RBP7.27□□□□□ -1.25
ACTN1-218ENST00000556343 CGB1A6NKQ9 187 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 CYSRT1A8MQ03 144 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 G3V3Q6 166 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 FBXO24O75426 580 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 TMEM50AO95807 157 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 IFNA5P01569 189 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 METTL15P1P0C7V9 234 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 RNASE2P10153 161 aaKnown RBP7.27□□□□□ -1.25
ACTN1-218ENST00000556343 AREGP15514 252 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 CTRB1P17538 263 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 GPX4P36969 197 aaPredicted RBP7.27□□□□□ -1.25
ACTN1-218ENST00000556343 CD300CQ08708 224 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 ZNF266Q14584 549 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 CTRB2Q6GPI1 263 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 OR8G2PQ6IF36 304 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 TMUB2Q71RG4 321 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 LILRB2Q8N423 598 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 KCNRGQ8N5I3 272 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 COMMD1Q8N668 190 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 OR5T1Q8NG75 326 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 CACNG8Q8WXS5 425 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 SLC35E1Q96K37 410 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 P2RX4Q99571 388 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 ARPC5LQ9BPX5 153 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 ARL6Q9H0F7 186 aa7.27□□□□□ -1.25
ACTN1-218ENST00000556343 IGSF23A1L1A6 192 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 TMEM89A2RUT3 159 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 FAM181BA6NEQ2 426 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 C15orf62A8K5M9 175 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 JTBO76095 146 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 CST7O76096 145 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 REG1AP05451 166 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 APELAP0DMC3 54 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 EGR2P11161 476 aaPredicted RBP7.26□□□□□ -1.25
ACTN1-218ENST00000556343 OPRK1P41145 380 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 DLK1P80370 383 aa7.26□□□□□ -1.25
ACTN1-218ENST00000556343 SSBP2P81877 361 aaPredicted RBP7.26□□□□□ -1.25
ACTN1-218ENST00000556343 NDPQ00604 133 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms